RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 SPINK2P20155 84 aa8.24□□□□□ -1.09
TUBB1-201ENST00000217133 WNT5AP41221 380 aa8.24□□□□□ -1.09
TUBB1-201ENST00000217133 OR3A1P47881 315 aa8.24□□□□□ -1.09
TUBB1-201ENST00000217133 DSCR4P56555 118 aaPredicted RBP8.24□□□□□ -1.09
TUBB1-201ENST00000217133 MRPL21Q7Z2W9 205 aaKnown RBP8.24□□□□□ -1.09
TUBB1-201ENST00000217133 MYPOPQ86VE0 399 aaPredicted RBP8.24□□□□□ -1.09
TUBB1-201ENST00000217133 CADM4Q8NFZ8 388 aa8.24□□□□□ -1.09
TUBB1-201ENST00000217133 CPT1CQ8TCG5 803 aa8.24□□□□□ -1.09
TUBB1-201ENST00000217133 SRXN1Q9BYN0 137 aa8.24□□□□□ -1.09
TUBB1-201ENST00000217133 PATZ1Q9HBE1 687 aaKnown RBP8.24□□□□□ -1.09
TUBB1-201ENST00000217133 PPP1R14DQ9NXH3 145 aa8.24□□□□□ -1.09
TUBB1-201ENST00000217133 POLR3KQ9Y2Y1 108 aaPredicted RBP8.24□□□□□ -1.09
TUBB1-201ENST00000217133 M0QZK8 103 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 GGCTO75223 188 aaKnown RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 IGKV1D-33P01593 117 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 IGKV1-33P01594 117 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 IGHV3-9P01782 118 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 FGFBP3Q8TAT2 258 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 UBALD1Q8TB05 177 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 R3HDM4Q96D70 268 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 RIMS4Q9H426 269 aaPredicted RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 PARD6AQ9NPB6 346 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 MANBALQ9NQG1 85 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 COL5A1P20908 1838 aaPredicted RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 GJE1A6NN92 205 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 CELA2AP08217 269 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 TDGF1P13385 188 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 IL3RAP26951 378 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 CARD18P57730 90 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 MLF1P58340 268 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 NXPH1P58417 271 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 RAC1P63000 192 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 FFAR4Q5NUL3 377 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 TMEM256Q8N2U0 113 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 LSM10Q969L4 123 aaKnown RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 TMEM208Q9BTX3 173 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 TMEM9BQ9NQ34 198 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 TRAV39A0A0B4J263 110 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 A0A1B0GUS0 222 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 LRP5LA4QPB2 252 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 A6NNC1 897 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 KIAA1324LA8MWY0 1029 aaPredicted RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 RBMXL2O75526 392 aaKnown RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 HPRT1P00492 218 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 LIFP15018 202 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 COX5AP20674 150 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 PLA2G5P39877 138 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 RPS16P62249 146 aaKnown RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 SRSF7Q16629 238 aaKnown RBP eCLIP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 ACSM6Q6P461 480 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 YRDCQ86U90 279 aaKnown RBP8.23□□□□□ -1.09
TUBB1-201ENST00000217133 ZDHHC23Q8IYP9 409 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 BTF3L4Q96K17 158 aa8.23□□□□□ -1.09
TUBB1-201ENST00000217133 CHD3Q12873 2000 aaKnown RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 MARCH11A6NNE9 402 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 C11orf94C9JXX5 98 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 DLEU1O43261 78 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 CXCL13O43927 109 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 ZIC3O60481 467 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 EDN3P14138 238 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 BMP5P22003 454 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 RELQ04864 619 aaPredicted RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 C9orf135Q5VTT2 229 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 PMS2CLQ68D20 193 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 SF3B5Q9BWJ5 86 aaKnown RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 LIN7CQ9NUP9 197 aaKnown RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 TMEM210A6NLX4 147 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 EGR1P18146 543 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 LCN2P80188 198 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 DAZAP2Q15038 168 aaPredicted RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 ZNF324BQ6AW86 544 aaPredicted RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 PCSK4Q6UW60 755 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 SLC25A45Q8N413 288 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 CMTM2Q8TAZ6 248 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 ZNF488Q96MN9 340 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 MTCH1Q9NZJ7 389 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 OR1A1Q9P1Q5 309 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 DCHS1Q96JQ0 3298 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 C1QTNF9BB2RNN3 333 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 IGKV1-39P01597 117 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 IGKV1-5P01602 117 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 CRYAAP02489 173 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 IGKV1D-39P04432 117 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 TYMSP04818 313 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 SP9P0CG40 484 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 CD33P20138 364 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 UBE2G2P60604 165 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 RAC3P60763 192 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 RNPS1Q15287 305 aaKnown RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 WDR74Q6RFH5 385 aaPredicted RBP8.22□□□□□ -1.09
TUBB1-201ENST00000217133 SEMA5BQ9P283 1151 aa8.22□□□□□ -1.09
TUBB1-201ENST00000217133 SYNGR1O43759 233 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 VENTXO95231 258 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 CCL2P13500 99 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 MPLP40238 635 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 TRIM61Q5EBN2 209 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 DCAF10Q5QP82 559 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 C20orf204Q6ZNR8 217 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 TMEM147Q9BVK8 224 aa8.21□□□□□ -1.09
TUBB1-201ENST00000217133 ZDHHC11Q9H8X9 412 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms