RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NDUFS6O75380 124 aaKnown RBP11.21□□□□□ -0.61
SRP54-201ENST00000216774 PPP1CBP62140 327 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 SLC10A1Q14973 349 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 MDS2Q8NDY4 140 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 SLC39A9Q9NUM3 307 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 KCNIP1Q9NZI2 227 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 NAT8Q9UHE5 227 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.62
SRP54-201ENST00000216774 PTBP3O95758 552 aaKnown RBP11.21□□□□□ -0.62
SRP54-201ENST00000216774 CLDN1O95832 211 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 P0C879 139 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 TRGC1P0CF51 173 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 ELLP55199 621 aaPredicted RBP11.21□□□□□ -0.62
SRP54-201ENST00000216774 CD81P60033 236 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 MEF2BQ02080 365 aaPredicted RBP11.21□□□□□ -0.62
SRP54-201ENST00000216774 OR2B11Q5JQS5 317 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 TMEM164Q5U3C3 297 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 FIP1L1Q6UN15 594 aaKnown RBP11.21□□□□□ -0.62
SRP54-201ENST00000216774 CYP2G1PQ6ZSU1 146 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 RPP25LQ8N5L8 163 aaKnown RBP11.21□□□□□ -0.62
SRP54-201ENST00000216774 ABHD5Q8WTS1 349 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 LHX4Q969G2 390 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.62
SRP54-201ENST00000216774 TMEM30CPA0ZSE6 113 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 TMEM210A6NLX4 147 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 CDIPTO14735 213 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 PHOX2AO14813 284 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 MBP02144 154 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 SOD3P08294 240 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 RAC2P15153 192 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 IGFBP7Q16270 282 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 FRZBQ92765 325 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 GALMQ96C23 342 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 OR2J1Q9GZK6 312 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 TMEM250H0YL14 139 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 HAND1O96004 215 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 EIF4EBP1Q13541 118 aaPredicted RBP11.2□□□□□ -0.62
SRP54-201ENST00000216774 ZNF766Q5HY98 468 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 OR8G2PQ6IF36 304 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 OR10D4PQ8NGN7 298 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 UBALD1Q8TB05 177 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 CDX2Q99626 313 aaPredicted RBP11.2□□□□□ -0.62
SRP54-201ENST00000216774 SMIM7Q9BQ49 75 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 TMEM147Q9BVK8 224 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 HES4Q9HCC6 221 aa11.2□□□□□ -0.62
SRP54-201ENST00000216774 OR5H1A6NKK0 313 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 LRRC30A6NM36 301 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 KBTBD11O94819 623 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 SELEP16581 610 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 CATR1Q13166 79 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 TMEM241Q24JQ0 296 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
SRP54-201ENST00000216774 TCTEX1D1Q8N7M0 179 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 WDYHV1Q96HA8 205 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 GPR61Q9BZJ8 451 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 CDH20Q9HBT6 801 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.19□□□□□ -0.62
SRP54-201ENST00000216774 TNRC18O15417 2968 aaPredicted RBP11.19□□□□□ -0.62
SRP54-201ENST00000216774 ESPL1Q14674 2120 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 CTXND1A0A1B0GTU2 59 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 A0A1W2PNU3 283 aaPredicted RBP11.19□□□□□ -0.62
SRP54-201ENST00000216774 C1QTNF9BB2RNN3 333 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 RAMP3O60896 148 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 IGKV1D-33P01593 117 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 IGKV1-33P01594 117 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 PSMB3P49720 205 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 GFI1BQ5VTD9 330 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 NCR3LG1Q68D85 454 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 SLC35E4Q6ICL7 350 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 OR10A7Q8NGE5 316 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 PFDN5Q99471 154 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 MRPL37Q9BZE1 423 aaKnown RBP11.19□□□□□ -0.62
SRP54-201ENST00000216774 OR2D2Q9H210 308 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 MANBALQ9NQG1 85 aa11.19□□□□□ -0.62
SRP54-201ENST00000216774 OOEPA6NGQ2 149 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 CELA3BP08861 270 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 CD46P15529 392 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 HIST1H1BP16401 226 aaKnown RBP11.18□□□□□ -0.62
SRP54-201ENST00000216774 TGFBR3Q03167 851 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 BEND4Q6ZU67 534 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 MYPOPQ86VE0 399 aaPredicted RBP11.18□□□□□ -0.62
SRP54-201ENST00000216774 ZNF383Q8NA42 475 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 OR1L1Q8NH94 360 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
SRP54-201ENST00000216774 SSX3Q99909 188 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 PYGO2Q9BRQ0 406 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 PITPNC1Q9UKF7 332 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 R4GN57 208 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 TRBV23-1A0A0A0MS06 115 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 C12orf77C9JDV5 145 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 PSPNO60542 156 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 KRASP01116 189 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 IL2RGP31785 369 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 G6PCP35575 357 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 OR3A1P47881 315 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 UBE2NP61088 152 aaKnown RBP11.18□□□□□ -0.62
SRP54-201ENST00000216774 LPAL2Q16609 132 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 FAM180AQ6UWF9 173 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms