RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PPIAL4DF5H284 164 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 I3L521 148 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 ST8SIA5O15466 376 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 PITX3O75364 302 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 CLDN1O95832 211 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 IGKV1-39P01597 117 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 IGKV1D-39P04432 117 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 PPIAL4FP0DN26 164 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 LPAR6P43657 344 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 GPR12P47775 334 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 EIF4EBP1Q13541 118 aaPredicted RBP14.46□□□□□ -0.1
VRK1-201ENST00000216639 KIAA2026Q5HYC2 2103 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 ZCCHC24Q8N2G6 241 aaKnown RBP14.46□□□□□ -0.1
VRK1-201ENST00000216639 TCTEX1D2Q8WW35 142 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 MARVELD3Q96A59 401 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 SMIM3Q9BZL3 60 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 LAMP3Q9UQV4 416 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 PPIAL4AQ9Y536 164 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 TMEM8BA6NDV4 472 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 SELLP14151 372 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 CAV2P51636 162 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 TMEM30BQ3MIR4 351 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 FAM53AQ6NSI3 398 aaPredicted RBP14.45□□□□□ -0.1
VRK1-201ENST00000216639 RP1L1Q8IWN7 2480 aaPredicted RBP14.45□□□□□ -0.1
VRK1-201ENST00000216639 FAM216BQ8N7L0 139 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 UBAC2Q8NBM4 344 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 TMED6Q8WW62 240 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 AGMATQ9BSE5 352 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 MAGT1Q9H0U3 335 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 C11orf1Q9H5F2 150 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 LYRM2Q9NU23 88 aaPredicted RBP14.45□□□□□ -0.1
VRK1-201ENST00000216639 PIEZO2Q9H5I5 2752 aa14.45□□□□□ -0.1
VRK1-201ENST00000216639 A0A0G2JRQ6 117 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 KBTBD11-OT1A0A1B0GTJ5 212 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 MFSD2BA6NFX1 497 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 TMEM178BH3BS89 294 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 ITGB1BP1O14713 200 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 CGB3P0DN86 165 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 CGB7P0DN87 165 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 RAB7AP51149 207 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 LOXL3P58215 753 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 EWSR1Q01844 656 aaKnown RBP eCLIP14.44□□□□□ -0.1
VRK1-201ENST00000216639 SPAG16Q8N0X2 631 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 CCL17Q92583 94 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 NEUROG1Q92886 237 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 TMEM106BQ9NUM4 274 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 CISD1Q9NZ45 108 aaKnown RBP14.44□□□□□ -0.1
VRK1-201ENST00000216639 CLN8Q9UBY8 286 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 CACNG5Q9UF02 275 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 MMP24Q9Y5R2 645 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 DYSFO75923 2080 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 DSPP15924 2871 aaKnown RBP14.44□□□□□ -0.1
VRK1-201ENST00000216639 hADV38S2A0JD32 116 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 ZNF729A6NN14 1252 aaPredicted RBP14.44□□□□□ -0.1
VRK1-201ENST00000216639 TMPRSS2O15393 492 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 IGKV1-5P01602 117 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 Q3ZCU0 254 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 TOR2AQ5JU69 321 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 BTNL3Q6UXE8 466 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 HSD17B13Q7Z5P4 300 aaPredicted RBP14.44□□□□□ -0.1
VRK1-201ENST00000216639 TGIF2LYQ8IUE0 185 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 FGFRL1Q8N441 504 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 CD300LFQ8TDQ1 290 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 C5orf30Q96GV9 206 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 RAB40CQ96S21 281 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 DCAF16Q9NXF7 216 aa14.44□□□□□ -0.1
VRK1-201ENST00000216639 FAM24AA6NFZ4 105 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 FGF16O43320 207 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 CHST1O43916 411 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 CLDN14O95500 239 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 RPL23AP62750 156 aaKnown RBP14.43□□□□□ -0.1
VRK1-201ENST00000216639 RPL30P62888 115 aaKnown RBP14.43□□□□□ -0.1
VRK1-201ENST00000216639 BAXQ07812 192 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 C17orf58Q2M2W7 97 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 DUX4L9Q6RFH8 374 aaPredicted RBP14.43□□□□□ -0.1
VRK1-201ENST00000216639 CORO2AQ92828 525 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 REG4Q9BYZ8 158 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 COA4Q9NYJ1 87 aa14.43□□□□□ -0.1
VRK1-201ENST00000216639 NDUFB7P17568 137 aa14.42□□□□□ -0.1
VRK1-201ENST00000216639 GRNP28799 593 aaKnown RBP14.42□□□□□ -0.1
VRK1-201ENST00000216639 NHLH2Q02577 135 aa14.42□□□□□ -0.1
VRK1-201ENST00000216639 MST1LQ2TV78 715 aa14.42□□□□□ -0.1
VRK1-201ENST00000216639 TMEM252Q8N6L7 170 aa14.42□□□□□ -0.1
VRK1-201ENST00000216639 GFOD1Q9NXC2 390 aa14.42□□□□□ -0.1
VRK1-201ENST00000216639 SLC25A10Q9UBX3 287 aaPredicted RBP14.42□□□□□ -0.1
VRK1-201ENST00000216639 FAM90A26D6RGX4 464 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 RAMP3O60896 148 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 NXPH3O95157 252 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 OMGP23515 440 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 MEF2CQ06413 473 aaPredicted RBP14.41□□□□□ -0.1
VRK1-201ENST00000216639 ZNF816Q0VGE8 651 aaPredicted RBP14.41□□□□□ -0.1
VRK1-201ENST00000216639 ZNF266Q14584 549 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 OR2B11Q5JQS5 317 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 CLEC9AQ6UXN8 241 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 Q6ZRM9 215 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 EIF4E3Q8N5X7 224 aaKnown RBP14.41□□□□□ -0.1
VRK1-201ENST00000216639 BARX1Q9HBU1 254 aaPredicted RBP14.41□□□□□ -0.1
VRK1-201ENST00000216639 IDI2-AS1Q9NZ38 188 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 GAB2Q9UQC2 676 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 MAP1BP46821 2468 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms