RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 NMSQ5H8A3 153 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 OR56B2PQ8NGI1 322 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 PHF7Q9BWX1 381 aaPredicted RBP12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 METTL7AQ9H8H3 244 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 IGLV3-12A0A075B6K2 115 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 RER1O15258 196 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 SCRG1O75711 98 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 TSPOP30536 169 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 SERF2P84101 59 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 NAT6Q93015 286 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 MRPS16Q9Y3D3 137 aaKnown RBP12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 NCOA6Q14686 2063 aaPredicted RBP12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 SH2D1BO14796 132 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 FOXL1Q12952 345 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 TBC1D26Q86UD7 250 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 FAM103A1Q9BTL3 118 aaKnown RBP12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 AKIRIN1Q9H9L7 192 aaPredicted RBP12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
TMEM38A-201ENST00000187762 MYO7BQ6PIF6 2116 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 SHANK1Q9Y566 2161 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 C5orf63A6NC05 138 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 F2Z2F3 143 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 MLNRO43193 412 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 TRAF3IP2O43734 574 aaPredicted RBP12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 RPS20P60866 119 aaKnown RBP12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 LHFPL4Q7Z7J7 247 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 BAGE2Q86Y30 109 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF295-AS1Q8N0V1 137 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 SIGLECL1Q8N7X8 197 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 PINX1Q96BK5 328 aaKnown RBP12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 SLC35D1Q9NTN3 355 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 CNTRLQ7Z7A1 2325 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 RHOGP84095 191 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 GUSBP11Q6P575 273 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF525Q8N782 197 aa12.65□□□□□ -0.38
TMEM38A-201ENST00000187762 DMDP11532 3685 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 E9PLN8 166 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 HMGB3O15347 200 aaKnown RBP12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 GDF9O60383 454 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 IGHG1P01857 330 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 SERPINA7P05543 415 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 CD99P14209 185 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 HOXC12P31275 282 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 PLA2G5P39877 138 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 PIGTQ969N2 578 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 UBE2ZQ9H832 354 aaPredicted RBP12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 TAAR3PQ9P1P4 343 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 CLN8Q9UBY8 286 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 FRYLO94915 3013 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 PI4KAP42356 2102 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 CACNA1EQ15878 2313 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 FAM166BA8MTA8 275 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 PPYP01298 95 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 VDAC1P21796 283 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 ZNF468Q5VIY5 522 aaPredicted RBP12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 C20orf196Q8IYI0 205 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 RPP25LQ8N5L8 163 aaKnown RBP12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 SGMS2Q8NHU3 365 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 FSCN3Q9NQT6 498 aa12.64□□□□□ -0.39
TMEM38A-201ENST00000187762 IGHV1-69-2A0A0G2JMI3 117 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 A0A1W2PQM1 296 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 IGKV1D-33P01593 117 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 IGKV1-33P01594 117 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 PSG1P11464 419 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 LRRC75BQ2VPJ9 315 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 KLHDC1Q8N7A1 406 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 SMIM12Q96EX1 92 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 NEIL1Q96FI4 390 aaPredicted RBP12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 OR5B21A6NL26 309 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 RNF212BA8MTL3 300 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 C1QTNF9BB2RNN3 333 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 GPX1P07203 203 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 CBLN1P23435 193 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 GNRHRP30968 328 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 ARL16Q0P5N6 197 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 BRICD5Q6PL45 260 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 SLC25A47Q6Q0C1 308 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 OR2M3Q8NG83 312 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 BCL2L2Q92843 193 aaPredicted RBP12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 GPHA2Q96T91 129 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 PNRC2Q9NPJ4 139 aaKnown RBP12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 IL19Q9UHD0 177 aa12.63□□□□□ -0.39
TMEM38A-201ENST00000187762 LOC102724200A0A096LPH7 203 aaPredicted RBP12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 IGHV2-26A0A0B4J1V2 119 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 CELA2AP08217 269 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 NBEAP1P0C6P0 100 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 RSPO4Q2I0M5 234 aaPredicted RBP12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 SLC25A53Q5H9E4 307 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 ERASQ7Z444 233 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 TBL2Q9Y4P3 447 aaKnown RBP12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 ZFAND5O76080 213 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 NRASP01111 189 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 KRASP01116 189 aa12.62□□□□□ -0.39
TMEM38A-201ENST00000187762 FAHP16930 419 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms