RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 CIDEAO60543 219 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 KLF7O75840 302 aaPredicted RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OPN1MWP04001 364 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OPN1MW2P0DN77 364 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OPN1MW3P0DN78 364 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 CEACAM8P31997 349 aaPredicted RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 ERVS71-1P61550 626 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OR8G2PQ6IF36 304 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 ZNF525Q8N782 197 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 AGBL5Q8NDL9 886 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OR10G4Q8NGN3 311 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 OR4X1Q8NH49 305 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 MRPL30Q8TCC3 161 aaKnown RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 LHX4Q969G2 390 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 IL22RA2Q969J5 263 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 GAL3ST2Q9H3Q3 398 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 ZNF552Q9H707 407 aaPredicted RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 WDR54Q9H977 334 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 VAX2Q9UIW0 290 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 ARHGAP21Q5T5U3 1957 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 UBE2L5PA0A1B0GUS4 154 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 A0A1W2PR80 420 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A10PA6NDY2 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A18PA6NE21 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A16PA6NEW6 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A20PA6NIJ5 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A8PA6NJQ4 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A7PA6NKC0 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A22PA8MWA6 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A12PA8MX19 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A5PA8MXJ8 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A23PA8MXZ1 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 ZNF737O75373 536 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 MRPL33O75394 65 aaKnown RBP8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 NGFP01138 241 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A15PP0C7V4 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A13PP0C7W8 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A14PP0C7W9 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 FAM90A24PP0C7X0 464 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 GDF1P27539 372 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 C16orf82Q7Z2V1 217 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 KCNE4Q8WWG9 221 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 SPSB4Q96A44 273 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 GPR87Q9BY21 358 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 PRDM14Q9GZV8 571 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 SH2D2AQ9NP31 389 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 SLC39A9Q9NUM3 307 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 PITPNC1Q9UKF7 332 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 R4GN57 208 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 DOCK7Q96N67 2140 aa8.95□□□□□ -0.98
CX3CL1-201ENST00000006053 ITGB1BP1O14713 200 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 DNPH1O43598 174 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 SELEP16581 610 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 CD82P27701 267 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 FOXG1P55316 489 aaPredicted RBP8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 TMEM95Q3KNT9 176 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 CEACAM21Q3KPI0 293 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 ZNF324BQ6AW86 544 aaPredicted RBP8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 HAPLN4Q86UW8 402 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 OR4C12Q96R67 309 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 KIAA1324LA8MWY0 1029 aaPredicted RBP8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 WDR1O75083 606 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 IL18BPO95998 194 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 IFNA1P01562 189 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 IGKV1-39P01597 117 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 IGKV1D-39P04432 117 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 OTX2P32243 289 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 TFPI2P48307 235 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 RIPPLY2Q5TAB7 128 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 MRGPRGQ86SM5 289 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 OR5T1Q8NG75 326 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 OR10V1Q8NGI7 309 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 MAFAQ8NHW3 353 aaPredicted RBP8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 MBD3L1Q8WWY6 194 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 CLUHP3Q96NS8 147 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 PRRG4Q9BZD6 226 aa8.94□□□□□ -0.98
CX3CL1-201ENST00000006053 TRBV24-1A0A075B6N3 115 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 OR4A8P0C604 315 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 HBG1P69891 147 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 HBG2P69892 147 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 COL10A1Q03692 680 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 TRIM61Q5EBN2 209 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 C11orf42Q8N5U0 333 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 GUCD1Q96NT3 240 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 VPS25Q9BRG1 176 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 TMEM242Q9NWH2 141 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 KIAA2026Q5HYC2 2103 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 ESPL1Q14674 2120 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 PATE3B3GLJ2 98 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 FGF5P12034 268 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 RPS16P62249 146 aaKnown RBP8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 RTP5Q14D33 572 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 ABLIM2Q6H8Q1 611 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 IFI44Q8TCB0 444 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 SLC25A22Q9H936 323 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 LPAR2Q9HBW0 351 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 PRSS50Q9UI38 385 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 IGKV1-5P01602 117 aa8.93□□□□□ -0.98
CX3CL1-201ENST00000006053 SRSF7Q16629 238 aaKnown RBP eCLIP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms