RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 C17orf100A8MU93 164 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 GNG4P50150 75 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 C1QTNF12Q5T7M4 302 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 SLC24A4Q8NFF2 622 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 ZNRF4Q8WWF5 429 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 CABLES2Q9BTV7 478 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 HMSDA8MTL9 139 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 COMPP49747 757 aaPredicted RBP8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 LY6EQ16553 131 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 SLC35E4Q6ICL7 350 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 MYPOPQ86VE0 399 aaPredicted RBP8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 ADAD2Q8NCV1 583 aaKnown RBP8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 FAM222BQ8WU58 562 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 ZNF737O75373 536 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 GALR1P47211 349 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 GLIPR1P48060 266 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 LRRC75AQ8NAA5 344 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 RHOVQ96L33 236 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 NKX6-2Q9C056 277 aaPredicted RBP8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 PARD6AQ9NPB6 346 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 U3KQ87 197 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 IGKV3-7A0A075B6H7 116 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 FAM78BQ5VT40 261 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 UNQ9370/PRO34162Q6UXP9 181 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 LURAP1Q96LR2 239 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 NPAS1Q99742 590 aa8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 NYNRINQ9P2P1 1898 aaKnown RBP8.85□□□□□ -0.99
NIPAL3-201ENST00000003912 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 A0A1W2PS18 150 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 H0Y8G0 127 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 ZNF154Q13106 437 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 ZNF273Q14593 569 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 GUK1Q16774 197 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 ACP7Q6ZNF0 438 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 SSMEM1Q8WWF3 244 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 SIP14410 1827 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 ZNF716A6NP11 495 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 G3V3Q6 166 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 SPCS3P61009 180 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 ERVS71-1P61550 626 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 DNM1P46Q6ZS02 220 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 HIST1H1EP10412 219 aaKnown RBP8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 NBL1P41271 181 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 HOXA4Q00056 320 aaPredicted RBP8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 OR2T10Q8NGZ9 312 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 PHYHIPLQ96FC7 376 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 DNAJC13O75165 2243 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 IGKV1D-43A0A0B4J1Z2 117 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 IQCF6A8MYZ5 107 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 F5H697 171 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 HAX1O00165 279 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 NPBWR2P48146 333 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 PSG7Q13046 419 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 CD200R1LQ6Q8B3 271 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 FAM90A1Q86YD7 464 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 OR4C13Q8NGP0 309 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 OR4A5Q8NH83 315 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 NRIP2Q9BQI9 281 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 DCTN5Q9BTE1 182 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 CKAP5Q14008 2032 aa8.84□□□□□ -0.99
NIPAL3-201ENST00000003912 TM4SF5O14894 197 aa8.84□□□□□ -1
NIPAL3-201ENST00000003912 ADRB1P08588 477 aa8.84□□□□□ -1
NIPAL3-201ENST00000003912 USF1P22415 310 aaPredicted RBP8.84□□□□□ -1
NIPAL3-201ENST00000003912 B2MP61769 119 aa8.84□□□□□ -1
NIPAL3-201ENST00000003912 LCN2P80188 198 aa8.84□□□□□ -1
NIPAL3-201ENST00000003912 RBPMS2Q6ZRY4 209 aaKnown RBP8.84□□□□□ -1
NIPAL3-201ENST00000003912 C16orf82Q7Z2V1 217 aa8.84□□□□□ -1
NIPAL3-201ENST00000003912 COL25A1Q9BXS0 654 aaPredicted RBP8.84□□□□□ -1
NIPAL3-201ENST00000003912 ALX4Q9H161 411 aaPredicted RBP8.84□□□□□ -1
NIPAL3-201ENST00000003912 VSIG4Q9Y279 399 aa8.84□□□□□ -1
NIPAL3-201ENST00000003912 WSB1Q9Y6I7 421 aa8.84□□□□□ -1
NIPAL3-201ENST00000003912 MOGAT2Q3SYC2 334 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 PLAC9Q5JTB6 97 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 POC1AQ8NBT0 407 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 REPIN1Q9BWE0 567 aaKnown RBP8.83□□□□□ -1
NIPAL3-201ENST00000003912 MANBALQ9NQG1 85 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 HIGD1AQ9Y241 93 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 RCC1P18754 421 aaPredicted RBP8.83□□□□□ -1
NIPAL3-201ENST00000003912 CDKN1AP38936 164 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 FABP9Q0Z7S8 132 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 PSG5Q15238 335 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 WFDC3Q8IUB2 231 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 ZNRF1Q8ND25 227 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 OR4P4Q8NGL7 312 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 RNASEK-C17orf49H0YIS7 233 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 SLC25A17O43808 307 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 TGFAP01135 160 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 EWSR1Q01844 656 aaKnown RBP eCLIP8.83□□□□□ -1
NIPAL3-201ENST00000003912 NHLH1Q02575 133 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 ZNF429Q86V71 674 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 LINC00052Q96N35 136 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 MMP26Q9NRE1 261 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 NCOR1O75376 2440 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 SPTBN2O15020 2390 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 IGHV3OR16-10A0A075B7F0 116 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 ZG16O60844 167 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 GAMTQ14353 236 aa8.83□□□□□ -1
NIPAL3-201ENST00000003912 KHDC3LQ587J8 217 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms