RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 LSAMPQ13449 338 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 P2RY14Q15391 338 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 RAB11BQ15907 218 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 OR51D1Q8NGF3 324 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 GON7Q9BXV9 100 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 LPAR5Q9H1C0 372 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 RIMS4Q9H426 269 aaPredicted RBP19.9■□□□□ 0.78
VEGFA-232ENST00000640653 PLSCR3Q9NRY6 295 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 ZFP57Q9NU63 452 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 NECAP2Q9NVZ3 263 aa19.9■□□□□ 0.78
VEGFA-232ENST00000640653 PRB2P02812 416 aaPredicted RBP19.89■□□□□ 0.77
VEGFA-232ENST00000640653 IGLL1P15814 213 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 CALRP27797 417 aaKnown RBP19.89■□□□□ 0.77
VEGFA-232ENST00000640653 RPL23AP62750 156 aaKnown RBP19.89■□□□□ 0.77
VEGFA-232ENST00000640653 TBCEQ15813 527 aaPredicted RBP19.89■□□□□ 0.77
VEGFA-232ENST00000640653 MOB1BQ7L9L4 216 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 C5orf24Q7Z6I8 188 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 SVOPQ8N4V2 548 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 OR2AK2Q8NG84 335 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 GFI1Q99684 422 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 ACOT13Q9NPJ3 140 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 STEAP1Q9UHE8 339 aa19.89■□□□□ 0.77
VEGFA-232ENST00000640653 A0A0A6YYD4 124 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 NAPSAO96009 420 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 SLC6A1P30531 599 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 FABP5Q01469 135 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 ZNF880Q6PDB4 577 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 ZNF367Q7RTV3 350 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 SETD6Q8TBK2 473 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 IL1F10Q8WWZ1 152 aa19.88■□□□□ 0.77
VEGFA-232ENST00000640653 RCC1LQ96I51 464 aaKnown RBP19.88■□□□□ 0.77
VEGFA-232ENST00000640653 LINC01548A6NM66 108 aa19.87■□□□□ 0.77
VEGFA-232ENST00000640653 RRP9O43818 475 aaKnown RBP19.87■□□□□ 0.77
VEGFA-232ENST00000640653 PSMD7P51665 324 aa19.87■□□□□ 0.77
VEGFA-232ENST00000640653 TEX38Q6PEX7 206 aa19.87■□□□□ 0.77
VEGFA-232ENST00000640653 ODF3L1Q8IXM7 274 aa19.87■□□□□ 0.77
VEGFA-232ENST00000640653 FAM89BQ8N5H3 189 aa19.87■□□□□ 0.77
VEGFA-232ENST00000640653 FAM71E2Q8N5Q1 922 aa19.87■□□□□ 0.77
VEGFA-232ENST00000640653 RAB26Q9ULW5 256 aa19.87■□□□□ 0.77
VEGFA-232ENST00000640653 NUDT19A8MXV4 375 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 SOCS1O15524 211 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 DUS4LO95620 317 aaKnown RBP19.86■□□□□ 0.77
VEGFA-232ENST00000640653 SOX6P35712 828 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 F2RL1P55085 397 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 MRPL20Q9BYC9 149 aaKnown RBP19.86■□□□□ 0.77
VEGFA-232ENST00000640653 AK3Q9UIJ7 227 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 HSF4Q9ULV5 492 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 MGAT4AQ9UM21 535 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 V9GY05 133 aa19.86■□□□□ 0.77
VEGFA-232ENST00000640653 TRBV6-6A0A0A6YYG2 114 aa19.85■□□□□ 0.77
VEGFA-232ENST00000640653 MMDQ15546 238 aa19.85■□□□□ 0.77
VEGFA-232ENST00000640653 PNLIPRP3Q17RR3 467 aa19.85■□□□□ 0.77
VEGFA-232ENST00000640653 FOXB2Q5VYV0 432 aa19.85■□□□□ 0.77
VEGFA-232ENST00000640653 ZNF833PQ6ZTB9 187 aa19.85■□□□□ 0.77
VEGFA-232ENST00000640653 NABP2Q9BQ15 211 aa19.85■□□□□ 0.77
VEGFA-232ENST00000640653 PIPOXQ9P0Z9 390 aa19.85■□□□□ 0.77
VEGFA-232ENST00000640653 SAA2-SAA4A0A096LPE2 208 aa19.84■□□□□ 0.77
VEGFA-232ENST00000640653 SAA2P0DJI9 122 aaPredicted RBP19.84■□□□□ 0.77
VEGFA-232ENST00000640653 FAM71F2Q6NXP2 309 aa19.84■□□□□ 0.77
VEGFA-232ENST00000640653 LINC00482Q8N8I6 264 aa19.84■□□□□ 0.77
VEGFA-232ENST00000640653 KLHL30-AS1Q8NEE0 82 aa19.84■□□□□ 0.77
VEGFA-232ENST00000640653 FAM3DQ96BQ1 224 aa19.84■□□□□ 0.77
VEGFA-232ENST00000640653 VDAC1P21796 283 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 OR3A3P47888 321 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 VEGFCP49767 419 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 CLDN12P56749 244 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 ETV3LQ6ZN32 361 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 Q6ZPA2 131 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 C8orf86Q6ZUL3 223 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 MRAPQ8TCY5 172 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 HSPB9Q9BQS6 159 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 ZNF251Q9BRH9 671 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 IFI27L2Q9H2X8 130 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 C12orf4Q9NQ89 552 aa19.83■□□□□ 0.77
VEGFA-232ENST00000640653 AURKAIP1Q9NWT8 199 aaPredicted RBP19.83■□□□□ 0.77
VEGFA-232ENST00000640653 FOXI3A8MTJ6 420 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-232ENST00000640653 PDCD5O14737 125 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 RAB29O14966 203 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 ST8SIA5O15466 376 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 THBS3P49746 956 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 ACTBP60709 375 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 HLA-DRB3P79483 266 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 SSX1Q16384 188 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 C2orf76Q3KRA6 126 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 CXorf66Q5JRM2 361 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-232ENST00000640653 ZNF695Q8IW36 515 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 MRPL41Q8IXM3 137 aaKnown RBP19.82■□□□□ 0.76
VEGFA-232ENST00000640653 OR56B1Q8NGI3 324 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 RBMXL1Q96E39 390 aaKnown RBP19.82■□□□□ 0.76
VEGFA-232ENST00000640653 ARHGAP5-AS1Q96IT6 56 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 HDHD3Q9BSH5 251 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-232ENST00000640653 GPR61Q9BZJ8 451 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 SLC23A1Q9UHI7 598 aa19.82■□□□□ 0.76
VEGFA-232ENST00000640653 ZNF107Q9UII5 783 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-232ENST00000640653 DENRO43583 198 aaKnown RBP19.81■□□□□ 0.76
VEGFA-232ENST00000640653 MYCNOSP40205 109 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 TMEM50BP56557 158 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 FOXE3Q13461 319 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 C18orf65Q6ZTR6 163 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 PECRQ9BY49 303 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms