RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ADAM30Q9UKF2 790 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 TRBV6-7A0A0A0MS04 114 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 LEUTXA8MZ59 168 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 HSPA12AO43301 675 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 RGS11O94810 467 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 TNFSF8P32971 234 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 CBX5P45973 191 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 IER3P46695 156 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 RAB13P51153 203 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 SLC9A3R2Q15599 337 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 C8orf31Q8N9H6 132 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 GPX8Q8TED1 209 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 SNAPC3Q92966 411 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 ABHD1Q96SE0 405 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 SSX3Q99909 188 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 ABHD14AQ9BUJ0 271 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 MMP27Q9H306 513 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 RDH8Q9NYR8 311 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 ANXA10Q9UJ72 324 aa10.66□□□□□ -0.7
GTF3A-209ENST00000640289 AMMECR1Q9Y4X0 333 aaPredicted RBP10.66□□□□□ -0.7
GTF3A-209ENST00000640289 H3BUX3 64 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 REG1BP48304 166 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 RIPPLY3P57055 190 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 ODF3L1Q8IXM7 274 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 LYG1Q8N1E2 194 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 OR2AK2Q8NG84 335 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 OR10J5Q8NHC4 309 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 TOMM40LQ969M1 308 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 RPEQ96AT9 228 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 CREB3L1Q96BA8 519 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 C11orf54Q9H0W9 315 aaPredicted RBP10.65□□□□□ -0.7
GTF3A-209ENST00000640289 IFI27L2Q9H2X8 130 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 IFT46Q9NQC8 304 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 ANAPC10Q9UM13 185 aa10.65□□□□□ -0.7
GTF3A-209ENST00000640289 NAV3Q8IVL0 2385 aa10.65□□□□□ -0.71
GTF3A-209ENST00000640289 A0A0A6YYJ9 748 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 HSD17B6O14756 317 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 LPLP06858 475 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 CEACAM3P40198 252 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 ARPC4P59998 168 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 UBA52P62987 128 aaKnown RBP10.64□□□□□ -0.71
GTF3A-209ENST00000640289 IL18Q14116 193 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 LY6EQ16553 131 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 LRRC75BQ2VPJ9 315 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 LY6G6FQ5SQ64 297 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 PIFOQ8TCI5 191 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 SSMEM1Q8WWF3 244 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 ST6GALNAC6Q969X2 333 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 ABHD14BQ96IU4 210 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 JMJD8Q96S16 334 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 GINS4Q9BRT9 223 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 AGMATQ9BSE5 352 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 CHIAQ9BZP6 476 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 TOLLIPQ9H0E2 274 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 SCPEP1Q9HB40 452 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 RNF150Q9ULK6 438 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 A3GALT2U3KPV4 340 aa10.64□□□□□ -0.71
GTF3A-209ENST00000640289 A0A1W2PPI3 338 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 VGLL3A8MV65 326 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 SULT1C2O00338 296 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 TPPPO94811 219 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 DIRAS3O95661 229 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 NAT1P18440 290 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 NFYAP23511 347 aaPredicted RBP10.63□□□□□ -0.71
GTF3A-209ENST00000640289 CD24P25063 80 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 IL3RAP26951 378 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 S100A5P33763 92 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 OR3A3P47888 321 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 DGCR2P98153 550 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 FBLN7Q53RD9 439 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 H1FOOQ8IZA3 346 aaPredicted RBP10.63□□□□□ -0.71
GTF3A-209ENST00000640289 OR52I2Q8NH67 350 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 RBMXL1Q96E39 390 aaKnown RBP10.63□□□□□ -0.71
GTF3A-209ENST00000640289 DPAGT1Q9H3H5 408 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 KLK11Q9UBX7 282 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 POMT1Q9Y6A1 747 aa10.63□□□□□ -0.71
GTF3A-209ENST00000640289 SAA2-SAA4A0A096LPE2 208 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 FABP12A6NFH5 140 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 OOSP1A8MZH6 123 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 J3QRK9 145 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 ITGB1BP1O14713 200 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 TIMM23O14925 209 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 GAPDHP04406 335 aaKnown RBP10.62□□□□□ -0.71
GTF3A-209ENST00000640289 CTXN2P0C2S0 81 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 OR8U9P0C7N5 309 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 SAA2P0DJI9 122 aaPredicted RBP10.62□□□□□ -0.71
GTF3A-209ENST00000640289 HLA-DMAP28067 261 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 ZNF137PP52743 207 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 ZNF816Q0VGE8 651 aaPredicted RBP10.62□□□□□ -0.71
GTF3A-209ENST00000640289 CNPY1Q3B7I2 92 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 RPL39P5Q59GN2 51 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 PYHIN1Q6K0P9 492 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 FAM131AQ6UXB0 335 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 CCDC190Q86UF4 302 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 LYSMD2Q8IV50 215 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 TMEM86BQ8N661 226 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 OR5AP2Q8NGF4 316 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 OR6Q1Q8NGQ2 317 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 OR8U1Q8NH10 309 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms