RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TRPM3Q9HCF6 1732 aaPredicted RBP1.48□□□□□ -2.17
CCDC7-216ENST00000640058 DNMT1P26358 1616 aaKnown RBP1.48□□□□□ -2.17
CCDC7-216ENST00000640058 LRPPRCP42704 1394 aaKnown RBP1.47□□□□□ -2.17
CCDC7-216ENST00000640058 COL18A1P39060 1754 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 SMIM23A6NLE4 172 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 GOLGA8RI6L899 631 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 ZW10O43264 779 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 EEF1E1O43324 174 aaKnown RBP1.47□□□□□ -2.17
CCDC7-216ENST00000640058 OR5F1O95221 314 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 RAB36O95755 333 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 IGKV1-16P04430 117 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 IFI30P13284 250 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 ACTR1BP42025 376 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 RWDD2BP57060 319 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 PDGFRLQ15198 375 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 EXOC3L4Q17RC7 722 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 LRRC26Q2I0M4 334 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 PLCZ1Q86YW0 608 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 ZNF565Q8N9K5 539 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 CCDC112Q8NEF3 446 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 ZNRF2Q8NHG8 242 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 CDC26Q8NHZ8 85 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 LMX1AQ8TE12 382 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 TAMM41Q96BW9 452 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 LLPHQ9BRT6 129 aaKnown RBP1.47□□□□□ -2.17
CCDC7-216ENST00000640058 SLC19A3Q9BZV2 496 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 DRC3Q9H069 523 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 GTSF1LQ9H1H1 148 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 FKBP14Q9NWM8 211 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 MRPL16Q9NX20 251 aaKnown RBP1.47□□□□□ -2.17
CCDC7-216ENST00000640058 TMEM216Q9P0N5 145 aa1.47□□□□□ -2.17
CCDC7-216ENST00000640058 CLUHO75153 1309 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 LOC102725191A0A1B0GVB3 256 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 GOLGA8MH3BSY2 632 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 LIN7AO14910 233 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-216ENST00000640058 TOX3O15405 576 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-216ENST00000640058 CYTH3O43739 400 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 CDK14O94921 469 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 FBP1P09467 338 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 IGHV3-30-3P0DP02 117 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 CRABP1P29762 137 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 RCVRNP35243 200 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 ITGB3BPQ13352 177 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-216ENST00000640058 RGS21Q2M5E4 152 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 FAM45BPQ6NSW5 357 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 Q6ZRU5 148 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 OR5L1Q8NGL2 311 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 OR2V1Q8NHB1 315 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 PPP1R14BQ96C90 147 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 UCK1Q9HA47 277 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 HSPE1-MOB4S4R3N1 261 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 CRB1P82279 1406 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 ROCK1Q13464 1354 aa1.46□□□□□ -2.18
CCDC7-216ENST00000640058 DSCAMO60469 2012 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 C1orf232A0A0U1RR37 186 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 IGSF23A1L1A6 192 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 TMEM210A6NLX4 147 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 TRPC5OSA6NMA1 111 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 SMLR1H3BR10 107 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 CALUO43852 315 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-216ENST00000640058 AHSA1O95433 338 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 PRB1P04280 392 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 KRT7P08729 469 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 GADD45AP24522 165 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 CD40LGP29965 261 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 PSMB3P49720 205 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 CEBPGP53567 150 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 MYL6P60660 151 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 RAB14P61106 215 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 B2MP61769 119 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 DYNLL1P63167 89 aaKnown RBP1.45□□□□□ -2.18
CCDC7-216ENST00000640058 SKP1P63208 163 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 MRPS25P82663 173 aaKnown RBP1.45□□□□□ -2.18
CCDC7-216ENST00000640058 PSG4Q00888 419 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 FADDQ13158 208 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 STX5Q13190 355 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 ZNHIT3Q15649 155 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-216ENST00000640058 SAPCD1Q5SSQ6 148 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 TTC33Q6PID6 262 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-216ENST00000640058 XKRXQ6PP77 449 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 SLC13A5Q86YT5 568 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-216ENST00000640058 CRLF3Q8IUI8 442 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 ZBTB8OSQ8IWT0 167 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 MSRB3Q8IXL7 192 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 BOD1L2Q8IYS8 172 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 LFNGQ8NES3 379 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 OR52E4Q8NGH9 312 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 MFSD8Q8NHS3 518 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 DYDC1Q8WWB3 177 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 UPK3BQ9BT76 320 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 GNB1LQ9BYB4 327 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 BCL2L14Q9BZR8 327 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 LINC00527Q9UJ94 153 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 PSMD13Q9UNM6 376 aa1.45□□□□□ -2.18
CCDC7-216ENST00000640058 RAD50Q92878 1312 aa1.44□□□□□ -2.18
CCDC7-216ENST00000640058 A0A0A6YYH2 397 aa1.44□□□□□ -2.18
CCDC7-216ENST00000640058 GOLGA6L10A6NI86 522 aa1.44□□□□□ -2.18
CCDC7-216ENST00000640058 A6NJ64 397 aa1.44□□□□□ -2.18
CCDC7-216ENST00000640058 GOLGA8KD6RF30 607 aa1.44□□□□□ -2.18
CCDC7-216ENST00000640058 H3BQV1 296 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms