RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 NRIP2Q9BQI9 281 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 TRAV12-3A0A0B4J271 114 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 RAX2Q96IS3 184 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 TOPAZ1Q8N9V7 1692 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 MBNL2Q5VZF2 373 aaKnown RBP11.56□□□□□ -0.56
UBE3A-228ENST00000638155 MVB12AQ96EY5 273 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 DMRT1Q9Y5R6 373 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 EDA2RQ9HAV5 297 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 ZGRF1Q86YA3 2104 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 UPK1AO00322 258 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 TMIGD3P0DMS9 266 aaPredicted RBP11.56□□□□□ -0.56
UBE3A-228ENST00000638155 PSG9Q00887 426 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 ZNF117Q03924 483 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 SH2D5Q6ZV89 423 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 ATOH7Q8N100 152 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 OR11G2Q8NGC1 345 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 MRGPRFQ96AM1 343 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 KCNE3Q9Y6H6 103 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 CXorf65A6NEN9 183 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 MMP16P51512 607 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 KIR3DL3Q8N743 410 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 PDCD11Q14690 1871 aaKnown RBP11.56□□□□□ -0.56
UBE3A-228ENST00000638155 TRGC2P03986 189 aa11.56□□□□□ -0.56
UBE3A-228ENST00000638155 CGB1A6NKQ9 187 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 IGF2P01344 180 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 GUCA2BQ16661 112 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 AGFG2O95081 481 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 RAE1P78406 368 aaKnown RBP11.55□□□□□ -0.56
UBE3A-228ENST00000638155 FOXB2Q5VYV0 432 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 MGST2Q99735 147 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 RTN4RQ9BZR6 473 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 CAPZBP47756 277 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 DEGS2Q6QHC5 323 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 OVCH2Q7RTZ1 564 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 LTBP3Q9NS15 1303 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 MEX3AA1L020 520 aaKnown RBP11.55□□□□□ -0.56
UBE3A-228ENST00000638155 HOXA3O43365 443 aaPredicted RBP11.55□□□□□ -0.56
UBE3A-228ENST00000638155 TSPOP30536 169 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 EWSR1Q01844 656 aaKnown RBP eCLIP11.55□□□□□ -0.56
UBE3A-228ENST00000638155 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 PTOV1Q86YD1 416 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 GAPTQ8N292 157 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 SCNM1Q9BWG6 230 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 PHF7Q9BWX1 381 aaPredicted RBP11.55□□□□□ -0.56
UBE3A-228ENST00000638155 BCL2L10Q9HD36 194 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 OR13H1Q8NG92 308 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 PRSS27Q9BQR3 290 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 TRBV23-1A0A0A0MS06 115 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 ZFAND6Q6FIF0 208 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 SMIM14Q96QK8 99 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 PCGF1Q9BSM1 259 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 MYOFQ9NZM1 2061 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 SYNGR1O43759 233 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 IGHV4-39P01824 125 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 FGF9P31371 208 aaPredicted RBP11.55□□□□□ -0.56
UBE3A-228ENST00000638155 CX3CL1P78423 397 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 FGF14Q92915 247 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 DIRC2Q96SL1 478 aa11.55□□□□□ -0.56
UBE3A-228ENST00000638155 TRAV8-6A0A0B4J262 113 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 COX6B1P14854 86 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 AGERQ15109 404 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 CITED1Q99966 193 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 SLC25A2Q9BXI2 301 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 IL36RNQ9UBH0 155 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 CRYBB2P43320 205 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 PAX2Q02962 417 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 TCTN3Q6NUS6 607 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 HBBP68871 147 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 SERF2P84101 59 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 HCFC2Q9Y5Z7 792 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 TMEM50BP56557 158 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 SIGMAR1Q99720 223 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 SLIRPQ9GZT3 109 aaKnown RBP11.54□□□□□ -0.56
UBE3A-228ENST00000638155 ZNF275Q9NSD4 429 aaPredicted RBP11.54□□□□□ -0.56
UBE3A-228ENST00000638155 ANKRD20A5PA0PJZ0 165 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 MC5RP33032 325 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 ZFPL1O95159 310 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 CTAG1AP78358 180 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 CYB5R2Q6BCY4 276 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 TREM2Q9NZC2 230 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 TBC1D29Q9UFV1 150 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 ABCA4P78363 2273 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 SCN11AQ9UI33 1791 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 SRIP30626 198 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 FHITP49789 147 aa11.54□□□□□ -0.56
UBE3A-228ENST00000638155 COL9A3Q14050 684 aaPredicted RBP11.54□□□□□ -0.56
UBE3A-228ENST00000638155 GDF9O60383 454 aa11.53□□□□□ -0.56
UBE3A-228ENST00000638155 MEF2BQ02080 365 aaPredicted RBP11.53□□□□□ -0.56
UBE3A-228ENST00000638155 TMEM52BQ4KMG9 183 aa11.53□□□□□ -0.56
UBE3A-228ENST00000638155 TXNDC17Q9BRA2 123 aa11.53□□□□□ -0.56
UBE3A-228ENST00000638155 ELOVL5Q9NYP7 299 aa11.53□□□□□ -0.56
UBE3A-228ENST00000638155 J3QR06 171 aa11.53□□□□□ -0.56
UBE3A-228ENST00000638155 EAF1Q96JC9 268 aaPredicted RBP11.53□□□□□ -0.56
UBE3A-228ENST00000638155 MS4A7Q9GZW8 240 aaPredicted RBP11.53□□□□□ -0.56
UBE3A-228ENST00000638155 SRSF6Q13247 344 aaKnown RBP11.53□□□□□ -0.56
UBE3A-228ENST00000638155 GVQW1Q8N7I0 195 aa11.53□□□□□ -0.56
UBE3A-228ENST00000638155 FSCN3Q9NQT6 498 aa11.53□□□□□ -0.56
UBE3A-228ENST00000638155 ZNF107Q9UII5 783 aaPredicted RBP11.53□□□□□ -0.56
UBE3A-228ENST00000638155 CEACAM18A8MTB9 384 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms