RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RAB39BQ96DA2 213 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 AKR1E2Q96JD6 320 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 NEURL2Q9BR09 285 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 PIMREGQ9BSJ6 248 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 CCL28Q9NRJ3 127 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 SLC2A9Q9NRM0 540 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 GFOD1Q9NXC2 390 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 GNG12Q9UBI6 72 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 KCNIP3Q9Y2W7 256 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 CELSR2Q9HCU4 2923 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 ARHGAP32A7KAX9 2087 aa9.7□□□□□ -0.86
CLN6-223ENST00000637823 CENPEQ02224 2701 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 A0A0B4J2A0 478 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 TEX13DA0A0J9YY54 714 aaPredicted RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 MPPED1O15442 326 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 IGHV2-5P01817 119 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 HLA-AP01891 365 aaKnown RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 OMGP23515 440 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 VAMP1P23763 118 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 SUPT4H1P63272 117 aaKnown RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 MSMO1Q15800 293 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 LTC4SQ16873 150 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 PHLDA2Q53GA4 152 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 ESCO2Q56NI9 601 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 CLEC2AQ6UVW9 174 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 ZNF818PQ6ZRF7 136 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 KCTD9Q7L273 389 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 ZBTB34Q8NCN2 500 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 LY6G5BQ8NDX9 201 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 BVESQ8NE79 360 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 C10orf105Q8TEF2 133 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 MITD1Q8WV92 249 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 RTN4IP1Q8WWV3 396 aaPredicted RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 DMRTB1Q96MA1 342 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 SSBP3Q9BWW4 388 aaPredicted RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 PARP12Q9H0J9 701 aaKnown RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 NARFLQ9H6Q4 476 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 BEX4Q9NWD9 120 aaPredicted RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 SHPKQ9UHJ6 478 aa9.69□□□□□ -0.86
CLN6-223ENST00000637823 RPUSD1Q9UJJ7 312 aaKnown RBP9.69□□□□□ -0.86
CLN6-223ENST00000637823 NAV2Q8IVL1 2488 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 ANKRD17O75179 2603 aaKnown RBP9.68□□□□□ -0.86
CLN6-223ENST00000637823 LOC105371242A0A075B767 164 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 PPIAL4CA0A0B4J2A2 164 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 C17orf98A8MV24 154 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 HSD17B6O14756 317 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 MMP23AO75900 390 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 CCNKO75909 580 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 IFNA2P01563 188 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 RBP4P02753 201 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 SULT1A3P0DMM9 295 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 SULT1A4P0DMN0 295 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 PPIAL4GP0DN37 164 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 CCL3L1P16619 93 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 DNASE1P24855 282 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 NFYBP25208 207 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 CD34P28906 385 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 RAB7AP51149 207 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 KRTAP10-9P60411 292 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 LMO4P61968 165 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 FCN2Q15485 313 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 Q3ZCU0 254 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 PRAMEF5Q5TYX0 476 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 FAM53AQ6NSI3 398 aaPredicted RBP9.68□□□□□ -0.86
CLN6-223ENST00000637823 AKAP14Q86UN6 197 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 ZNF645Q8N7E2 425 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 OR2AK2Q8NG84 335 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 CLDND2Q8NHS1 167 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 PPP1R14BQ96C90 147 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 GALNT14Q96FL9 552 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 PERPQ96FX8 193 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 PHB2Q99623 299 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 SUCNR1Q9BXA5 334 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 BPESC1Q9GZL8 116 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 NAA60Q9H7X0 242 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 RNF150Q9ULK6 438 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 PSG11Q9UQ72 335 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 GAB2Q9UQC2 676 aa9.68□□□□□ -0.86
CLN6-223ENST00000637823 hCG_1809904A0A1W2PP81 198 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 A0A1W2PPE2 198 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 A0A1W2PR64 198 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 A0A1W2PRV1 198 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 VWC2LB2RUY7 222 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 PHF1O43189 567 aaPredicted RBP9.67□□□□□ -0.86
CLN6-223ENST00000637823 PGLYRP1O75594 196 aaPredicted RBP9.67□□□□□ -0.86
CLN6-223ENST00000637823 B3GALNT1O75752 331 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 LIPFP07098 398 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 ANXA3P12429 323 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 SLC9A3R2Q15599 337 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 TBC1D26Q86UD7 250 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 DRAM1Q8N682 238 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 UXS1Q8NBZ7 420 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 COQ8AQ8NI60 647 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 CASTOR1Q8WTX7 329 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 OR2D2Q9H210 308 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
CLN6-223ENST00000637823 C3orf85A0A1B0GTC6 90 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 RNF212BA8MTL3 300 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 A8MXK9 166 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms