RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 CDK1P06493 297 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 CHATP28329 748 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 ACTBP60709 375 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 CFHR3Q02985 330 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 C6orf141Q5SZD1 244 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 FAM27D1Q5T7N8 215 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 OR10K2Q6IF99 312 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 C11orf87Q6NUJ2 197 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 C5orf24Q7Z6I8 188 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 OR2AK2Q8NG84 335 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 YPEL2Q96QA6 119 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 ZNF251Q9BRH9 671 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 ABRACLQ9P1F3 81 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 ZNF580Q9UK33 172 aa17.85■□□□□ 0.45
CHRNA7-229ENST00000637552 VSIG8P0DPA2 414 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 RPS27AP62979 156 aaKnown RBP17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 ODF3L1Q8IXM7 274 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 KCNG3Q8TAE7 436 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 C4orf3Q8WVX3 66 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 PHYHIPQ92561 330 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 B9D2Q9BPU9 175 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 NABP2Q9BQ15 211 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 STEAP1Q9UHE8 339 aa17.84■□□□□ 0.45
CHRNA7-229ENST00000637552 PTGES3LE9PB15 166 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 PSMB8P28062 276 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 HMGN3Q15651 99 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 HSD17B12Q53GQ0 312 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 RNLSQ5VYX0 342 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 C6orf201Q7Z4U5 140 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 LRRTM1Q86UE6 522 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 IL1F10Q8WWZ1 152 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 CHCHD6Q9BRQ6 235 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 FAAP24Q9BTP7 215 aa17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 CHMP1AQ9HD42 196 aaPredicted RBP17.83■□□□□ 0.44
CHRNA7-229ENST00000637552 SAA2-SAA4A0A096LPE2 208 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 NBR2O15453 112 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 RAMP3O60896 148 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 SAA2P0DJI9 122 aaPredicted RBP17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 HTR2CP28335 458 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 OR3A3P47888 321 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 LUMP51884 338 aaPredicted RBP17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 SPHARQ15513 63 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 LY6G6FQ5SQ64 297 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 C1orf100Q5SVJ3 147 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 C9orf66Q5T8R8 295 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 TMEM65Q6PI78 240 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 ZNF833PQ6ZTB9 187 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 CEACAM19Q7Z692 300 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 KCNK15Q9H427 330 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 PARP11Q9NR21 331 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 KIAA1456Q9P272 454 aa17.82■□□□□ 0.44
CHRNA7-229ENST00000637552 TENM3Q9P273 2699 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 HLA-DRB1P01911 266 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 SRMP19623 302 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 CNTFRP26992 372 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 MED22Q15528 200 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 SETD6Q8TBK2 473 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 NICN1Q9BSH3 213 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 OR51J1Q9H342 316 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 SCN3BQ9NY72 215 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 WSB1Q9Y6I7 421 aa17.81■□□□□ 0.44
CHRNA7-229ENST00000637552 SEC14L6B5MCN3 397 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 ATP6V0E1O15342 81 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 BLVRBP30043 206 aaPredicted RBP17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 UNC119Q13432 240 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 SVOPQ8N4V2 548 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 OR6M1Q8NGM8 313 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 UFD1Q92890 307 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 RITA1Q96K30 269 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 TM2D1Q9BX74 207 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 ANKRD60Q9BZ19 345 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 IFI27L2Q9H2X8 130 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 PLEKHJ1Q9NW61 149 aa17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 LSM2Q9Y333 95 aaKnown RBP17.8■□□□□ 0.44
CHRNA7-229ENST00000637552 NBEAL2Q6ZNJ1 2754 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 G3V318 75 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 SLC22A1O15245 554 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 ST8SIA5O15466 376 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 BPNT1O95861 308 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 C5orf64Q2M2E5 130 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 FAM71F2Q6NXP2 309 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 MOB1BQ7L9L4 216 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 OR11H1Q8NG94 326 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 PIPOXQ9P0Z9 390 aa17.79■□□□□ 0.44
CHRNA7-229ENST00000637552 IGHV7-81A0A0B4J1V7 117 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 TRAV41A0A0B4J266 112 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 NAPSAO96009 420 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 UCHL1P09936 223 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 FHL3Q13643 280 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 LIPKQ5VXJ0 399 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 LIN54Q6MZP7 749 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 FAM131AQ6UXB0 335 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 NPBQ8NG41 125 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 MYOZ3Q8TDC0 251 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 UBE2E2Q96LR5 201 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 URM1Q9BTM9 101 aaKnown RBP17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 PLGRKTQ9HBL7 147 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 SLC23A1Q9UHI7 598 aa17.78■□□□□ 0.44
CHRNA7-229ENST00000637552 TMEM14DPA8MWL7 114 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms