RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TNFSF13O75888 250 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 PPBPP02775 128 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 GZMHP20718 246 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 OPRM1P35372 400 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 RTL6Q6ICC9 239 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 CXorf67Q86X51 503 aaPredicted RBP9.81□□□□□ -0.84
CLN6-217ENST00000636964 MARCH1Q8TCQ1 289 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 ZCCHC14Q8WYQ9 949 aaKnown RBP9.81□□□□□ -0.84
CLN6-217ENST00000636964 STARD4Q96DR4 205 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 NOL4LQ96MY1 436 aaPredicted RBP9.81□□□□□ -0.84
CLN6-217ENST00000636964 PRRT1Q99946 306 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 CDH20Q9HBT6 801 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 M0R036 132 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 ZNF205O95201 554 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 BCL3P20749 454 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 APOBEC3AP31941 199 aaPredicted RBP9.8□□□□□ -0.84
CLN6-217ENST00000636964 NPY4RP50391 375 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 KIAA0141Q14154 515 aaPredicted RBP9.8□□□□□ -0.84
CLN6-217ENST00000636964 ALKBH6Q3KRA9 238 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 OR10AD1Q8NGE0 317 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2AAQ96QV6 131 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 TAF9BQ9HBM6 251 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 IL36RNQ9UBH0 155 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 AK3Q9UIJ7 227 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 ESPL1Q14674 2120 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 FIGNL2A6NMB9 653 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 PI3P19957 117 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 DUSP1P28562 367 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 FHITP49789 147 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 NDUFA6P56556 154 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 ATP6V1FQ16864 119 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 CEACAM21Q3KPI0 293 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 PRSS57Q6UWY2 283 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 ASCL4Q6XD76 172 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 OR5H2Q8NGV7 314 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 ZNF488Q96MN9 340 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 PARP11Q9NR21 331 aa9.8□□□□□ -0.84
CLN6-217ENST00000636964 RBM7Q9Y580 266 aaKnown RBP9.8□□□□□ -0.84
CLN6-217ENST00000636964 C20orf202A1L168 122 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 ANKRD30BLA7E2S9 258 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 MSTNO14793 375 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 SYNGR1O43759 233 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 WDR1O75083 606 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 OR7C1O76099 320 aaPredicted RBP9.79□□□□□ -0.84
CLN6-217ENST00000636964 MBPP02686 304 aaPredicted RBP9.79□□□□□ -0.84
CLN6-217ENST00000636964 SNCAP37840 140 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 RAB32Q13637 225 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 PRSS54Q6PEW0 395 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 OR5L1Q8NGL2 311 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 TERB2Q8NHR7 220 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 EMG1Q92979 244 aaKnown RBP9.79□□□□□ -0.84
CLN6-217ENST00000636964 DIRC2Q96SL1 478 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 PROCRQ9UNN8 238 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 SUPT4H1P63272 117 aaKnown RBP9.79□□□□□ -0.84
CLN6-217ENST00000636964 IL15RAQ13261 267 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 PRAMEF5Q5TYX0 476 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 PRAMEF6Q5VXH4 476 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 OR8G2PQ6IF36 304 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 HOGA1Q86XE5 327 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 CISD2Q8N5K1 135 aaKnown RBP9.79□□□□□ -0.84
CLN6-217ENST00000636964 ZDHHC22Q8N966 263 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 WDR31Q8NA23 367 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 EHFQ9NZC4 300 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 FAM215AQ9Y5M1 114 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 BSNQ9UPA5 3926 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 CST4P01036 141 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 IFNA17P01571 189 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 CXCL1P09341 107 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 GLRA1P23415 457 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 MPZP25189 248 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 PTTG1IPP53801 180 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 PPP1CBP62140 327 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 ANKRD55Q3KP44 614 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 ZNF343Q6P1L6 599 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 OR1J1Q8NGS3 322 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 MTCH1Q9NZJ7 389 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 OR14J1Q9UGF5 321 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 MMP24Q9Y5R2 645 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 ZGRF1Q86YA3 2104 aa9.79□□□□□ -0.84
CLN6-217ENST00000636964 ZNF727A8MUV8 499 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 HSPB6O14558 160 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 HKR1P10072 659 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 CHATP28329 748 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 CD81P60033 236 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 OR5I1Q13606 314 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 KHDC3LQ587J8 217 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 C5orf24Q7Z6I8 188 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 SLC25A40Q8TBP6 338 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 TECTBQ96PL2 329 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 HINT2Q9BX68 163 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 FZR1Q9UM11 496 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 HEATR1Q9H583 2144 aaKnown RBP9.78□□□□□ -0.84
CLN6-217ENST00000636964 MED19A0JLT2 244 aaPredicted RBP9.78□□□□□ -0.84
CLN6-217ENST00000636964 CADP27708 2225 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 OR3A1P47881 315 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 RBM11P57052 281 aaKnown RBP9.78□□□□□ -0.84
CLN6-217ENST00000636964 RPL19P84098 196 aaKnown RBP9.78□□□□□ -0.84
CLN6-217ENST00000636964 MIDNQ504T8 468 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 OR5P3Q8WZ94 311 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms