RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CFAP54Q96N23 3096 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 HS3ST1O14792 307 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
CLN6-215ENST00000636674 NEURL1O76050 574 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 LPAL2Q16609 132 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 OR2B11Q5JQS5 317 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
CLN6-215ENST00000636674 HIST3H2BBQ8N257 126 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 FAM210BQ96KR6 192 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 WDR61Q9GZS3 305 aaKnown RBP12.33□□□□□ -0.44
CLN6-215ENST00000636674 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
CLN6-215ENST00000636674 ARHGAP21Q5T5U3 1957 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 PHOX2AO14813 284 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 PPP1R2P9O14990 202 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 IFNA1P01562 189 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 TRGC2P03986 189 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 WNT5AP41221 380 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 CD81P60033 236 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
CLN6-215ENST00000636674 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 ZNF497Q6ZNH5 498 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 TIPARPQ7Z3E1 657 aaKnown RBP12.32□□□□□ -0.44
CLN6-215ENST00000636674 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 TMEM9BQ9NQ34 198 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 TIMM9Q9Y5J7 89 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 ZNF407Q9C0G0 2248 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 ZFP92A6NM28 416 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 PATE3B3GLJ2 98 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 LILRA1O75019 489 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 OPN1MWP04001 364 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 METTL15P1P0C7V9 234 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 OPN1MW2P0DN77 364 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 OPN1MW3P0DN78 364 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 SRYQ05066 204 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 IZUMO4Q1ZYL8 232 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 CENPVQ7Z7K6 275 aaPredicted RBP12.32□□□□□ -0.44
CLN6-215ENST00000636674 Q8IYB0 196 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 C17orf78Q8N4C9 275 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 ZPBPQ9BS86 351 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
CLN6-215ENST00000636674 MBNL3Q9NUK0 354 aaKnown RBP12.32□□□□□ -0.44
CLN6-215ENST00000636674 PTBP3O95758 552 aaKnown RBP12.31□□□□□ -0.44
CLN6-215ENST00000636674 CELA3AP09093 270 aa12.31□□□□□ -0.44
CLN6-215ENST00000636674 IAPPP10997 89 aa12.31□□□□□ -0.44
CLN6-215ENST00000636674 LCN15Q6UWW0 184 aa12.31□□□□□ -0.44
CLN6-215ENST00000636674 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
CLN6-215ENST00000636674 J3QW42 95 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 ZNHIT1O43257 154 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 SOD3P08294 240 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 ACP1P24666 158 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 ERVK11-1P61568 191 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 TMEM14EPQ6UXP3 125 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 LILRB2Q8N423 598 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 ABHD5Q8WTS1 349 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 IL1F10Q8WWZ1 152 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 THOC3Q96J01 351 aaKnown RBP12.3□□□□□ -0.44
CLN6-215ENST00000636674 GP6Q9HCN6 339 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 LOXL2Q9Y4K0 774 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 WIPI2Q9Y4P8 454 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 FRYLO94915 3013 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 ARGFXA6NJG6 315 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 RNF212BA8MTL3 300 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 ATXN7O15265 892 aaPredicted RBP12.3□□□□□ -0.44
CLN6-215ENST00000636674 RHBDL1O75783 438 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 TRGC1P0CF51 173 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 HIST1H1BP16401 226 aaKnown RBP12.3□□□□□ -0.44
CLN6-215ENST00000636674 WDR25Q64LD2 544 aaPredicted RBP12.3□□□□□ -0.44
CLN6-215ENST00000636674 FRZBQ92765 325 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 TAF15Q92804 592 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLN6-215ENST00000636674 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
CLN6-215ENST00000636674 WDFY3Q8IZQ1 3526 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 TRBV23-1A0A0A0MS06 115 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 CLN3Q13286 438 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 OR2T2Q6IF00 324 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 CYP2G1PQ6ZSU1 146 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 OR10D4PQ8NGN7 298 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 OR4C12Q96R67 309 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 RTL8AQ9BWD3 113 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 TTTY12Q9BZ98 90 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 SPRY4Q9C004 299 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 PPP1R3CQ9UQK1 317 aa12.29□□□□□ -0.44
CLN6-215ENST00000636674 A0A1W2PR80 420 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 OR2H2O95918 312 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 SLC38A11Q08AI6 406 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 OR1K1Q8NGR3 316 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 PYGO2Q9BRQ0 406 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 GPR61Q9BZJ8 451 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 ARRDC1-AS1Q9H2J1 176 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 PRDM13Q9H4Q3 707 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 NAT8Q9UHE5 227 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms