RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 C12orf4Q9NQ89 552 aa8.85□□□□□ -0.99
DDX41-219ENST00000629036 ABCB10Q9NRK6 738 aa8.85□□□□□ -0.99
DDX41-219ENST00000629036 DAPK2Q9UIK4 370 aa8.85□□□□□ -0.99
DDX41-219ENST00000629036 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
DDX41-219ENST00000629036 RYR3Q15413 4870 aa8.85□□□□□ -0.99
DDX41-219ENST00000629036 TNCP24821 2201 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 IGKV1D-8A0A087WSZ0 117 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 ZNF736B4DX44 427 aaPredicted RBP8.84□□□□□ -0.99
DDX41-219ENST00000629036 SNRNP70P08621 437 aaKnown RBP8.84□□□□□ -0.99
DDX41-219ENST00000629036 FCGR3AP08637 254 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 SCTP09683 121 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 GNB3P16520 340 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 REG1BP48304 166 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 MXD1Q05195 221 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 STEAP3Q658P3 488 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 CCDC144NLQ6NUI1 221 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 C16orf82Q7Z2V1 217 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 OR4C13Q8NGP0 309 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 OR10X1Q8NGY0 326 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 RAB3CQ96E17 227 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 ABHD14AQ9BUJ0 271 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 NPFFR1Q9GZQ6 430 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 TOLLIPQ9H0E2 274 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 RIMS4Q9H426 269 aaPredicted RBP8.84□□□□□ -0.99
DDX41-219ENST00000629036 OR2S2Q9NQN1 319 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 OR1A1Q9P1Q5 309 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 GNG12Q9UBI6 72 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 PITPNC1Q9UKF7 332 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 NOTCH3Q9UM47 2321 aa8.84□□□□□ -0.99
DDX41-219ENST00000629036 ITGB1BP1O14713 200 aa8.83□□□□□ -1
DDX41-219ENST00000629036 LANCL1O43813 399 aa8.83□□□□□ -1
DDX41-219ENST00000629036 PROP1O75360 226 aa8.83□□□□□ -1
DDX41-219ENST00000629036 ALDH3B2P48448 385 aa8.83□□□□□ -1
DDX41-219ENST00000629036 SCAND1P57086 179 aa8.83□□□□□ -1
DDX41-219ENST00000629036 Q6ZS49 121 aa8.83□□□□□ -1
DDX41-219ENST00000629036 ZNF833PQ6ZTB9 187 aa8.83□□□□□ -1
DDX41-219ENST00000629036 GALMQ96C23 342 aa8.83□□□□□ -1
DDX41-219ENST00000629036 CMSS1Q9BQ75 279 aaKnown RBP8.83□□□□□ -1
DDX41-219ENST00000629036 SLC25A33Q9BSK2 321 aa8.83□□□□□ -1
DDX41-219ENST00000629036 CABLES2Q9BTV7 478 aa8.83□□□□□ -1
DDX41-219ENST00000629036 FUNDC2Q9BWH2 189 aa8.83□□□□□ -1
DDX41-219ENST00000629036 NAA50Q9GZZ1 169 aaKnown RBP8.83□□□□□ -1
DDX41-219ENST00000629036 PLSCR3Q9NRY6 295 aa8.83□□□□□ -1
DDX41-219ENST00000629036 SAA2-SAA4A0A096LPE2 208 aa8.82□□□□□ -1
DDX41-219ENST00000629036 IGHV3-72A0A0B4J1Y9 119 aa8.82□□□□□ -1
DDX41-219ENST00000629036 SH2D7A6NKC9 451 aaPredicted RBP8.82□□□□□ -1
DDX41-219ENST00000629036 ADARB2-AS1A8MUL3 147 aa8.82□□□□□ -1
DDX41-219ENST00000629036 AIREO43918 545 aa8.82□□□□□ -1
DDX41-219ENST00000629036 SSX5O60225 188 aa8.82□□□□□ -1
DDX41-219ENST00000629036 IGKV1D-33P01593 117 aa8.82□□□□□ -1
DDX41-219ENST00000629036 IGKV1-33P01594 117 aa8.82□□□□□ -1
DDX41-219ENST00000629036 GAPDHP04406 335 aaKnown RBP8.82□□□□□ -1
DDX41-219ENST00000629036 TFAP2AP05549 437 aa8.82□□□□□ -1
DDX41-219ENST00000629036 SAA2P0DJI9 122 aaPredicted RBP8.82□□□□□ -1
DDX41-219ENST00000629036 BRS3P32247 399 aa8.82□□□□□ -1
DDX41-219ENST00000629036 RPS19P39019 145 aaKnown RBP8.82□□□□□ -1
DDX41-219ENST00000629036 MNDAP41218 407 aa8.82□□□□□ -1
DDX41-219ENST00000629036 OR3A3P47888 321 aa8.82□□□□□ -1
DDX41-219ENST00000629036 NCS1P62166 190 aa8.82□□□□□ -1
DDX41-219ENST00000629036 LSAMPQ13449 338 aa8.82□□□□□ -1
DDX41-219ENST00000629036 CTF1Q16619 201 aa8.82□□□□□ -1
DDX41-219ENST00000629036 ZNF260Q3ZCT1 412 aa8.82□□□□□ -1
DDX41-219ENST00000629036 C11orf88Q6PI97 169 aa8.82□□□□□ -1
DDX41-219ENST00000629036 KLHDC1Q8N7A1 406 aa8.82□□□□□ -1
DDX41-219ENST00000629036 C5orf56Q8N8D9 126 aa8.82□□□□□ -1
DDX41-219ENST00000629036 C5orf30Q96GV9 206 aa8.82□□□□□ -1
DDX41-219ENST00000629036 MRPL20Q9BYC9 149 aaKnown RBP8.82□□□□□ -1
DDX41-219ENST00000629036 RAB9BQ9NP90 201 aa8.82□□□□□ -1
DDX41-219ENST00000629036 RHBDL2Q9NX52 303 aa8.82□□□□□ -1
DDX41-219ENST00000629036 KCNIP1Q9NZI2 227 aa8.82□□□□□ -1
DDX41-219ENST00000629036 ETV7Q9Y603 341 aa8.82□□□□□ -1
DDX41-219ENST00000629036 SERPINE3A8MV23 424 aa8.81□□□□□ -1
DDX41-219ENST00000629036 TRDCB7Z8K6 153 aa8.81□□□□□ -1
DDX41-219ENST00000629036 ST8SIA5O15466 376 aa8.81□□□□□ -1
DDX41-219ENST00000629036 GABARAPO95166 117 aa8.81□□□□□ -1
DDX41-219ENST00000629036 DIRAS3O95661 229 aa8.81□□□□□ -1
DDX41-219ENST00000629036 RANBP1P43487 201 aa8.81□□□□□ -1
DDX41-219ENST00000629036 LSM3P62310 102 aaKnown RBP8.81□□□□□ -1
DDX41-219ENST00000629036 SRSF7Q16629 238 aaKnown RBP eCLIP8.81□□□□□ -1
DDX41-219ENST00000629036 TIMM50Q3ZCQ8 353 aa8.81□□□□□ -1
DDX41-219ENST00000629036 OR2T6Q8NHC8 308 aa8.81□□□□□ -1
DDX41-219ENST00000629036 CAPSLQ8WWF8 208 aa8.81□□□□□ -1
DDX41-219ENST00000629036 IL1F10Q8WWZ1 152 aa8.81□□□□□ -1
DDX41-219ENST00000629036 MAFIPQ8WZ33 124 aa8.81□□□□□ -1
DDX41-219ENST00000629036 EAF1Q96JC9 268 aaPredicted RBP8.81□□□□□ -1
DDX41-219ENST00000629036 NABP2Q9BQ15 211 aa8.81□□□□□ -1
DDX41-219ENST00000629036 ATG5Q9H1Y0 275 aa8.81□□□□□ -1
DDX41-219ENST00000629036 CHMP1AQ9HD42 196 aaPredicted RBP8.81□□□□□ -1
DDX41-219ENST00000629036 SLC23A1Q9UHI7 598 aa8.81□□□□□ -1
DDX41-219ENST00000629036 ZNF230Q9UIE0 474 aaPredicted RBP8.81□□□□□ -1
DDX41-219ENST00000629036 MOB4Q9Y3A3 225 aa8.81□□□□□ -1
DDX41-219ENST00000629036 TRBV6-7A0A0A0MS04 114 aa8.8□□□□□ -1
DDX41-219ENST00000629036 TMEM235A6NFC5 223 aa8.8□□□□□ -1
DDX41-219ENST00000629036 FGF16O43320 207 aa8.8□□□□□ -1
DDX41-219ENST00000629036 TXNL1O43396 289 aa8.8□□□□□ -1
DDX41-219ENST00000629036 CD3GP09693 182 aa8.8□□□□□ -1
DDX41-219ENST00000629036 CD1BP29016 333 aa8.8□□□□□ -1
DDX41-219ENST00000629036 ARHGDIBP52566 201 aa8.8□□□□□ -1
DDX41-219ENST00000629036 ABCA11PQ4W5N1 156 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms