RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 SOX6P35712 828 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 TPBGQ13641 420 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 LIPKQ5VXJ0 399 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 ZNF880Q6PDB4 577 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 TMEM91Q6ZNR0 172 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 ZNF695Q8IW36 515 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 TMEM203Q969S6 136 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 GALMQ96C23 342 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 P2RX4Q99571 388 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 HSPB9Q9BQS6 159 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 GPR61Q9BZJ8 451 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 KCNK15Q9H427 330 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 ISYNA1Q9NPH2 558 aa9.51□□□□□ -0.89
UBR1-212ENST00000627960 A0A0A6YYD4 124 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 RGS10O43665 173 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
UBR1-212ENST00000627960 NAPSAO96009 420 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 IGF1P05019 195 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 ELANEP08246 267 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 MYF6P23409 242 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 BLVRBP30043 206 aaPredicted RBP9.5□□□□□ -0.89
UBR1-212ENST00000627960 OR3A3P47888 321 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 CFHR3Q02985 330 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 FOXE3Q13461 319 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 ZNF833PQ6ZTB9 187 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 SVOPQ8N4V2 548 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 RNF152Q8N8N0 203 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 OR6M1Q8NGM8 313 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 RAX2Q96IS3 184 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 RITA1Q96K30 269 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 GFI1Q99684 422 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 NABP2Q9BQ15 211 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 MCRIP2Q9BUT9 160 aaKnown RBP9.5□□□□□ -0.89
UBR1-212ENST00000627960 MRPL20Q9BYC9 149 aaKnown RBP9.5□□□□□ -0.89
UBR1-212ENST00000627960 LPAR5Q9H1C0 372 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 CHMP1AQ9HD42 196 aaPredicted RBP9.5□□□□□ -0.89
UBR1-212ENST00000627960 ABRACLQ9P1F3 81 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
UBR1-212ENST00000627960 WI2-2373I1.2A0A1W2PRP0 233 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 SLC17A2O00624 439 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 HSMCR30P0CW71 290 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 HOXD3P31249 432 aaPredicted RBP9.49□□□□□ -0.89
UBR1-212ENST00000627960 CDX1P47902 265 aaPredicted RBP9.49□□□□□ -0.89
UBR1-212ENST00000627960 ACTBP60709 375 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 RPS25P62851 125 aaKnown RBP9.49□□□□□ -0.89
UBR1-212ENST00000627960 P2RY14Q15391 338 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 MMDQ15546 238 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 TRAM1Q15629 374 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 CXorf66Q5JRM2 361 aaPredicted RBP9.49□□□□□ -0.89
UBR1-212ENST00000627960 LCNL1Q6ZST4 164 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 FAM89BQ8N5H3 189 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 OR2AK2Q8NG84 335 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 SETD6Q8TBK2 473 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 IL1F10Q8WWZ1 152 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 DPF1Q92782 380 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 DUX3Q96PT4 197 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 CHCHD6Q9BRQ6 235 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 ANKRD60Q9BZ19 345 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 IFI27L2Q9H2X8 130 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 RIMS4Q9H426 269 aaPredicted RBP9.49□□□□□ -0.89
UBR1-212ENST00000627960 PLEKHJ1Q9NW61 149 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 STEAP1Q9UHE8 339 aa9.49□□□□□ -0.89
UBR1-212ENST00000627960 ZNF107Q9UII5 783 aaPredicted RBP9.49□□□□□ -0.89
UBR1-212ENST00000627960 SAA2-SAA4A0A096LPE2 208 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 TRBV6-6A0A0A6YYG2 114 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 CCL24O00175 119 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 SOCS1O15524 211 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 ARL6IP5O75915 188 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 IGHG4P01861 327 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 SAA2P0DJI9 122 aaPredicted RBP9.48□□□□□ -0.89
UBR1-212ENST00000627960 SLC2A2P11168 524 aaPredicted RBP9.48□□□□□ -0.89
UBR1-212ENST00000627960 ARSBP15848 533 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 CPEP16870 476 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 VDAC1P21796 283 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 CRHBPP24387 322 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 PSMA1P25786 263 aaKnown RBP9.48□□□□□ -0.89
UBR1-212ENST00000627960 CNTFRP26992 372 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 MLLT11Q13015 90 aaPredicted RBP9.48□□□□□ -0.89
UBR1-212ENST00000627960 KIR2DS1Q14954 304 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 MOB1BQ7L9L4 216 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 PRSS48Q7RTY5 328 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 KCTD7Q96MP8 289 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 ZNF251Q9BRH9 671 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 URM1Q9BTM9 101 aaKnown RBP9.48□□□□□ -0.89
UBR1-212ENST00000627960 CCDC90BQ9GZT6 254 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 PLGRKTQ9HBL7 147 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 AK3Q9UIJ7 227 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 HSF4Q9ULV5 492 aa9.48□□□□□ -0.89
UBR1-212ENST00000627960 AK6Q9Y3D8 172 aaKnown RBP9.48□□□□□ -0.89
UBR1-212ENST00000627960 FOXI3A8MTJ6 420 aaPredicted RBP9.47□□□□□ -0.89
UBR1-212ENST00000627960 ITGB1BP1O14713 200 aa9.47□□□□□ -0.89
UBR1-212ENST00000627960 NBR2O15453 112 aa9.47□□□□□ -0.89
UBR1-212ENST00000627960 ST8SIA5O15466 376 aa9.47□□□□□ -0.89
UBR1-212ENST00000627960 HLA-DRB1P01911 266 aa9.47□□□□□ -0.89
UBR1-212ENST00000627960 OR5H8P0DN80 308 aa9.47□□□□□ -0.89
UBR1-212ENST00000627960 PSMB8P28062 276 aa9.47□□□□□ -0.89
UBR1-212ENST00000627960 PPIFP30405 207 aaKnown RBP9.47□□□□□ -0.89
UBR1-212ENST00000627960 MAP2K4P45985 399 aa9.47□□□□□ -0.89
UBR1-212ENST00000627960 TMEM50BP56557 158 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms