RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CCL13Q99616 98 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 PARP12Q9H0J9 701 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 RAB1BQ9H0U4 201 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 FAM234AQ9H0X4 552 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 OR2W1Q9Y3N9 320 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 ZANQ9Y493 2812 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 DOCK11Q5JSL3 2073 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 TEX13DA0A0J9YY54 714 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 ODAMA1E959 279 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 MEX3AA1L020 520 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 DBX1A6NMT0 343 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 GOSR2O14653 212 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 SIGLEC5O15389 551 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 TMPRSS2O15393 492 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 OR2A4O95047 310 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 GZMHP20718 246 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 P2RX3P56373 397 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 DSCR9P59020 149 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 KCNJ8Q15842 424 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 Q5BKY6 102 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 LIN54Q6MZP7 749 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 DTX2Q86UW9 622 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 H1FOOQ8IZA3 346 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 CCDC71LQ8N9Z2 235 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 COQ8AQ8NI60 647 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 SECTM1Q8WVN6 248 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 OR2A7Q96R45 310 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 RSRP1Q9BUV0 290 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 YAE1D1Q9NRH1 226 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 SLC2A9Q9NRM0 540 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 PRR13Q9NZ81 148 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 OR6C3Q9NZP0 311 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 OPN4Q9UHM6 478 aa7.87□□□□□ -1.15
PDLIM5-223ENST00000627587 ATRQ13535 2644 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 CRYM-AS1A6NIL9 109 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 C15orf65H3BRN8 121 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 SPINT2O43291 252 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 SIX6O95475 246 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 IGLV2-14P01704 120 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 HBZP02008 142 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 C1QBP02746 253 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 GIPP09681 153 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 ERP29P30040 261 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 GNRHRP30968 328 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 SLC9A3R2Q15599 337 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 CR1LQ2VPA4 569 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 ANKRD55Q3KP44 614 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 PHLDA2Q53GA4 152 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 NLRC3Q7RTR2 1065 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 TCF23Q7RTU1 214 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 NOXA1Q86UR1 476 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 FAM185AQ8N0U4 392 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 FAM216BQ8N7L0 139 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 OR1L1Q8NH94 360 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 RTN4IP1Q8WWV3 396 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 ARL11Q969Q4 196 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 CHIAQ9BZP6 476 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 SLC5A7Q9GZV3 580 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 NCOR1P1Q9H4R4 102 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 KCNIP3Q9Y2W7 256 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 USF3Q68DE3 2245 aa7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 FBN1P35555 2871 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 YLPM1P49750 1951 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-223ENST00000627587 A0A0B4J2A0 478 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 LYNX1G3V0Z9 82 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 GPR31O00270 319 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 CGB3P0DN86 165 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 CGB7P0DN87 165 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 LYNX1P0DP58 116 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 S100GP29377 79 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 SSTR5P35346 364 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 CEACAM6P40199 344 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 LUMP51884 338 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 RAP2BP61225 183 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 ZNF818PQ6ZRF7 136 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 KCTD9Q7L273 389 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 CMTM1Q8IZ96 169 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 OR11H4Q8NGC9 324 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 OR10V1Q8NGI7 309 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 ASB13Q8WXK3 278 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 TRAF4Q9BUZ4 470 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 RANBP3Q9H6Z4 567 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 NAA60Q9H7X0 242 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 RAB9BQ9NP90 201 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 TMEM160Q9NX00 188 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 RDH8Q9NYR8 311 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 LPAR3Q9UBY5 353 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 SHPKQ9UHJ6 478 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 RBM7Q9Y580 266 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 NDUFA2O43678 99 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 RP2O75695 350 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 LY6HO94772 140 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 F12P00748 615 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 HLA-GP17693 338 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 COL8A2P25067 703 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 GZMKP49863 264 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 GNMTQ14749 295 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 UTF1Q5T230 341 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 LYPD2Q6UXB3 125 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 OR5M8Q8NGP6 311 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms