RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 FOXG1P55316 489 aaPredicted RBP11□□□□□ -0.65
MSH6-215ENST00000622629 BAGE3Q86Y29 109 aa11□□□□□ -0.65
MSH6-215ENST00000622629 BAGE2Q86Y30 109 aa11□□□□□ -0.65
MSH6-215ENST00000622629 RBMXL3Q8N7X1 1067 aaKnown RBP11□□□□□ -0.65
MSH6-215ENST00000622629 NABP1Q96AH0 204 aa11□□□□□ -0.65
MSH6-215ENST00000622629 ABHD14BQ96IU4 210 aa11□□□□□ -0.65
MSH6-215ENST00000622629 ALPK3Q96L96 1907 aa11□□□□□ -0.65
MSH6-215ENST00000622629 LNP1A1A4G5 178 aa11□□□□□ -0.65
MSH6-215ENST00000622629 E9PLN8 166 aa11□□□□□ -0.65
MSH6-215ENST00000622629 PHOX2AO14813 284 aa11□□□□□ -0.65
MSH6-215ENST00000622629 FBP1P09467 338 aa11□□□□□ -0.65
MSH6-215ENST00000622629 SLC23A3Q6PIS1 610 aa11□□□□□ -0.65
MSH6-215ENST00000622629 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
MSH6-215ENST00000622629 MTCH1Q9NZJ7 389 aa11□□□□□ -0.65
MSH6-215ENST00000622629 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
MSH6-215ENST00000622629 TRGV10A0A0A0MS01 117 aa11□□□□□ -0.65
MSH6-215ENST00000622629 ZNF716A6NP11 495 aa11□□□□□ -0.65
MSH6-215ENST00000622629 PRRG2O14669 202 aa11□□□□□ -0.65
MSH6-215ENST00000622629 APOA2P02652 100 aa11□□□□□ -0.65
MSH6-215ENST00000622629 ZNF90Q03938 601 aa11□□□□□ -0.65
MSH6-215ENST00000622629 CISD2Q8N5K1 135 aaKnown RBP11□□□□□ -0.65
MSH6-215ENST00000622629 COMMD5Q9GZQ3 224 aa11□□□□□ -0.65
MSH6-215ENST00000622629 LYRM2Q9NU23 88 aaPredicted RBP11□□□□□ -0.65
MSH6-215ENST00000622629 IGSF23A1L1A6 192 aa11□□□□□ -0.65
MSH6-215ENST00000622629 KLK10O43240 276 aa11□□□□□ -0.65
MSH6-215ENST00000622629 MPZP25189 248 aa11□□□□□ -0.65
MSH6-215ENST00000622629 UCP2P55851 309 aa11□□□□□ -0.65
MSH6-215ENST00000622629 UCP3P55916 312 aa11□□□□□ -0.65
MSH6-215ENST00000622629 FOXC1Q12948 553 aa11□□□□□ -0.65
MSH6-215ENST00000622629 ZNF600Q6ZNG1 722 aa11□□□□□ -0.65
MSH6-215ENST00000622629 LHFPL1Q86WI0 220 aa11□□□□□ -0.65
MSH6-215ENST00000622629 OR1L1Q8NH94 360 aa11□□□□□ -0.65
MSH6-215ENST00000622629 BOD1Q96IK1 185 aa11□□□□□ -0.65
MSH6-215ENST00000622629 ZNF703Q9H7S9 590 aaPredicted RBP11□□□□□ -0.65
MSH6-215ENST00000622629 AURKAIP1Q9NWT8 199 aaPredicted RBP11□□□□□ -0.65
MSH6-215ENST00000622629 SEMA5BQ9P283 1151 aa11□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A10PA6NDY2 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A18PA6NE21 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A16PA6NEW6 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 OOEPA6NGQ2 149 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A20PA6NIJ5 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A8PA6NJQ4 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A7PA6NKC0 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A22PA8MWA6 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A12PA8MX19 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A5PA8MXJ8 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A23PA8MXZ1 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A15PP0C7V4 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A13PP0C7W8 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A14PP0C7W9 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 FAM90A24PP0C7X0 464 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 CDC34P49427 236 aaPredicted RBP10.99□□□□□ -0.65
MSH6-215ENST00000622629 RND3P61587 244 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 CA5BP1Q8WTZ4 195 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
MSH6-215ENST00000622629 TMPRSS5Q9H3S3 457 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 DUXBA0A1W2PPF3 345 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 PINLYPA6NC86 204 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 ERVS71-1P61550 626 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 BTNL8Q6UX41 500 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 C5orf24Q7Z6I8 188 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 R3HDM4Q96D70 268 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 GMPPAQ96IJ6 420 aaPredicted RBP10.99□□□□□ -0.65
MSH6-215ENST00000622629 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
MSH6-215ENST00000622629 MED13LQ71F56 2210 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 PCDH15Q96QU1 1955 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 F6UZH7 168 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 CSRP2Q16527 193 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 BSXQ3C1V8 233 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 ZNF880Q6PDB4 577 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 ABCA4P78363 2273 aa10.99□□□□□ -0.65
MSH6-215ENST00000622629 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 PROB1E7EW31 1015 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 F8VVB4 439 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 F8VWA3 439 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 FGFRL1Q8N441 504 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 OR10X1Q8NGY0 326 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 DDA1Q9BW61 102 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 EGLN1Q9GZT9 426 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 FOXD3Q9UJU5 478 aaPredicted RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 COL6A6A6NMZ7 2263 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 NUP210Q8TEM1 1887 aaPredicted RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 IGHV3OR15-7A0A075B7D8 119 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 YIF1AO95070 293 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 IGFBP7Q16270 282 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 MOGAT3Q86VF5 341 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 SMIM8Q96KF7 97 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 VAX2Q9UIW0 290 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 A0A1W2PPE3 182 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 DVL1O14640 695 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 HBZP02008 142 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 CRYGSP22914 178 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 ZFP36L1Q07352 338 aaKnown RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 RTL8BQ17RB0 113 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 INO80CQ6PI98 192 aaPredicted RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 FAM214BQ7L5A3 538 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 OR5D13Q8NGL4 314 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 LRFN3Q9BTN0 628 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 NGBQ9NPG2 151 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms