RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ABCA11PQ4W5N1 156 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 MCFD2Q8NI22 146 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 CAPSLQ8WWF8 208 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 RAB3CQ96E17 227 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 AKR1E2Q96JD6 320 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 CMTM3Q96MX0 182 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 C6orf62Q9GZU0 229 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 LPAR5Q9H1C0 372 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 NOTCH3Q9UM47 2321 aa14.32□□□□□ -0.12
SCAMP4-213ENST00000621748 ORC5O43913 435 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 LPLP06858 475 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 S100A5P33763 92 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 LOXL3P58215 753 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 NSUN5P1Q3KNT7 163 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 SIGIRRQ6IA17 410 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 DRAM1Q8N682 238 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 OR10R2Q8NGX6 335 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 OR56B4Q8NH76 319 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 CITED2Q99967 270 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 CHMP1AQ9HD42 196 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 ETAA1Q9NY74 926 aa14.31□□□□□ -0.12
SCAMP4-213ENST00000621748 A0A075B6Q4 140 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 A0A0A6YYH2 397 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 A6NJ64 397 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 ADARB2-AS1A8MUL3 147 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 SDCBPO00560 298 aaPredicted RBP14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 LDLRAD4O15165 306 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 OPN1MWP04001 364 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 SNRNP70P08621 437 aaKnown RBP14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 FAM106CPP0CH98 169 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 OPN1MW2P0DN77 364 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 OPN1MW3P0DN78 364 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 ARFRP1Q13795 201 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 PDLIM3Q53GG5 364 aaPredicted RBP14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 THNSL2Q86YJ6 484 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 C1QL4Q86Z23 238 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 GAPTQ8N292 157 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 OR52M1Q8NGK5 317 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 OR5H6Q8NGV6 325 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 OR10X1Q8NGY0 326 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 OR4K15Q8NH41 348 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 NICN1Q9BSH3 213 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 RAB9BQ9NP90 201 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 GFOD1Q9NXC2 390 aa14.3□□□□□ -0.12
SCAMP4-213ENST00000621748 IGHV3-43A0A0B4J1X8 118 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 UBE2QL1A1L167 161 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 A6NHS1 94 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 C12orf77C9JDV5 145 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 SOCS1O15524 211 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 CA11O75493 328 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 APOA1P02647 267 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 CD3GP09693 182 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 IGHV3-43DP0DP04 118 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 RAB7AP51149 207 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 FAM89BQ8N5H3 189 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 OR5AU1Q8NGC0 362 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 TRAPPC2LQ9UL33 140 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 HSF4Q9ULV5 492 aa14.29□□□□□ -0.12
SCAMP4-213ENST00000621748 HPGDSO60760 199 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 RCC1P18754 421 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 REG1BP48304 166 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 TMEM69Q5SWH9 247 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 NDUFA11Q86Y39 141 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 OR8H3Q8N146 312 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 LINC00311Q8N616 119 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 C15orf40Q8WUR7 153 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 FAAP24Q9BTP7 215 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 ABCG5Q9H222 651 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 RIMS4Q9H426 269 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 KCNIP1Q9NZI2 227 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 TGP01266 2768 aa14.28□□□□□ -0.12
SCAMP4-213ENST00000621748 TRAV18A0A075B6X5 111 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 M0QZK8 103 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 HSD17B6O14756 317 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 SLC31A2O15432 143 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 CHATP28329 748 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 CD83Q01151 205 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 ZNF816Q0VGE8 651 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 HES1Q14469 280 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 HNF4GQ14541 408 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 TCTEX1D4Q5JR98 221 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 C6orf201Q7Z4U5 140 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 C5orf24Q7Z6I8 188 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 CENPVQ7Z7K6 275 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 C8orf31Q8N9H6 132 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 OR1L1Q8NH94 360 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 SETD6Q8TBK2 473 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 ARHGAP5-AS1Q96IT6 56 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 PECRQ9BY49 303 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 MOB4Q9Y3A3 225 aa14.27□□□□□ -0.13
SCAMP4-213ENST00000621748 IGHV1-3A0A0C4DH29 117 aa14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 SERPINE3A8MV23 424 aa14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 G3V4G9 280 aa14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 SPINT2O43291 252 aa14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 IGKV1D-33P01593 117 aa14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 IGKV1-33P01594 117 aa14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 HBZP02008 142 aa14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 GAPDHP04406 335 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 GSTP1P09211 210 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-213ENST00000621748 TMEM11P17152 192 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms