RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 HLA-HP01893 362 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 PET100P0DJ07 73 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 NKX2-1P43699 371 aaPredicted RBP9.2□□□□□ -0.94
CDH1-214ENST00000621016 CRIP3Q6Q6R5 217 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 FBXW12Q6X9E4 464 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 POC1AQ8NBT0 407 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 AGBL5Q8NDL9 886 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 ZNF738Q8NE65 137 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 NABP1Q96AH0 204 aa9.2□□□□□ -0.94
CDH1-214ENST00000621016 FAM166BA8MTA8 275 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 SERPINE3A8MV23 424 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 H3BP45 60 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
CDH1-214ENST00000621016 KLF7O75840 302 aaPredicted RBP9.19□□□□□ -0.94
CDH1-214ENST00000621016 PPBPP02775 128 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 OR10J1P30954 320 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 CDKN1AP38936 164 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 PSG4Q00888 419 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 TRIM61Q5EBN2 209 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 OR10D3Q8NH80 312 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 SGCZQ96LD1 299 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 HES7Q9BYE0 225 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 CHODLQ9H9P2 273 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 TPRP12270 2363 aaKnown RBP9.19□□□□□ -0.94
CDH1-214ENST00000621016 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 AHRRA9YTQ3 701 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 CST7O76096 145 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 COX6A1P12074 109 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 FOXG1P55316 489 aaPredicted RBP9.19□□□□□ -0.94
CDH1-214ENST00000621016 DSCR4P56555 118 aaPredicted RBP9.19□□□□□ -0.94
CDH1-214ENST00000621016 HERV-K104P61576 105 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 RND3P61587 244 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 IZUMO4Q1ZYL8 232 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 MRPL14Q6P1L8 145 aaKnown RBP9.19□□□□□ -0.94
CDH1-214ENST00000621016 LINC00696Q6ZRV3 163 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 OR1F12Q8NHA8 337 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 IL1F10Q8WWZ1 152 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 PP6455Q8WZ26 134 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 ZNF488Q96MN9 340 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 SCRT1Q9BWW7 348 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 RNF115Q9Y4L5 304 aa9.19□□□□□ -0.94
CDH1-214ENST00000621016 KIR2DL5BA0A0G2JN68 375 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 KIR2DL5BA0A0G2JPC4 375 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 GRIFINA4D1Z8 144 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 NPIPB13A6NJU9 1138 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 NPIPB4C9JG80 1138 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 HS3ST1O14792 307 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 CEACAM3P40198 252 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 FOLR3P41439 243 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 GLIPR1P48060 266 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 GFRA1P56159 465 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 CLDN15P56746 228 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 KIR2DL5AQ8N109 375 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 ZCCHC14Q8WYQ9 949 aaKnown RBP9.18□□□□□ -0.94
CDH1-214ENST00000621016 TVP23CQ96ET8 276 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 PRRG4Q9BZD6 226 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 PROK2Q9HC23 129 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 CPAMD8Q8IZJ3 1885 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 PTPRZ1P23471 2315 aaPredicted RBP9.18□□□□□ -0.94
CDH1-214ENST00000621016 HSD17B6O14756 317 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 MSTNO14793 375 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 CELA3AP09093 270 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 GPM6AP51674 278 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 LHFPL1Q86WI0 220 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 FADS6Q8N9I5 356 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 RNASEH2CQ8TDP1 164 aaKnown RBP9.18□□□□□ -0.94
CDH1-214ENST00000621016 FOXB1Q99853 325 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 PCGF1Q9BSM1 259 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 TP73-AS1Q9UF72 201 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 UBE2J1Q9Y385 318 aaPredicted RBP9.18□□□□□ -0.94
CDH1-214ENST00000621016 ADAMTS9Q9P2N4 1935 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 C5orf49A4QMS7 147 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 FAM24AA6NFZ4 105 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 SMAGPQ0VAQ4 97 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 HIST3H3Q16695 136 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 SPATA46Q5T0L3 261 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 OR4A47Q6IF82 309 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 SHISA2Q6UWI4 295 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 FAM89BQ8N5H3 189 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 Q96M66 194 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 NECAP2Q9NVZ3 263 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 WSB1Q9Y6I7 421 aa9.18□□□□□ -0.94
CDH1-214ENST00000621016 MED13Q9UHV7 2174 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 ZNF16P17020 682 aaPredicted RBP9.17□□□□□ -0.94
CDH1-214ENST00000621016 GNRHRP30968 328 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
CDH1-214ENST00000621016 ARF1P84077 181 aaKnown RBP9.17□□□□□ -0.94
CDH1-214ENST00000621016 SRSF4Q08170 494 aaKnown RBP9.17□□□□□ -0.94
CDH1-214ENST00000621016 MALLQ13021 153 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 SLAQ13239 276 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 SCGB2A2Q13296 93 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 SLC25A53Q5H9E4 307 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 OSR2Q8N2R0 312 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 ZNF611Q8N823 705 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 OR13D1Q8NGV5 346 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 RDH5Q92781 318 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 NAT6Q93015 286 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 KIAA1549Q9HCM3 1950 aa9.17□□□□□ -0.94
CDH1-214ENST00000621016 A0A1W2PR80 420 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms