RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TP53RKQ96S44 253 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 TNFSF18Q9UNG2 199 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 KIAA2026Q5HYC2 2103 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 A0A0B4J2A0 478 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 ZNF705EA8MWA4 302 aaPredicted RBP8.36□□□□□ -1.07
VTA1-205ENST00000620996 H7C1Q1 480 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 OR8U9P0C7N5 309 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 HLA-GP17693 338 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 CEACAM6P40199 344 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 RAB2AP61019 212 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 TNFAIP6P98066 277 aaPredicted RBP8.36□□□□□ -1.07
VTA1-205ENST00000620996 KRBOX4Q5JUW0 171 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 ACOT7LQ6ZUV0 252 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 LGI3Q8N145 548 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 ZCCHC24Q8N2G6 241 aaKnown RBP8.36□□□□□ -1.07
VTA1-205ENST00000620996 OR8U1Q8NH10 309 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 RFESDQ8TAC1 157 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 OR2S2Q9NQN1 319 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 SHPKQ9UHJ6 478 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 RNF150Q9ULK6 438 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 TPRP12270 2363 aaKnown RBP8.36□□□□□ -1.07
VTA1-205ENST00000620996 A0A0D9SG52 128 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 CCL21O00585 134 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 CD80P33681 288 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 NPBWR1P48145 328 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 EDDM3BP56851 147 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 OR2B8PP59922 312 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 TMEM187Q14656 261 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 CLEC9AQ6UXN8 241 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 ZNF497Q6ZNH5 498 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 LIAT1Q6ZQX7 453 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 C1orf174Q8IYL3 243 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 OR1L1Q8NH94 360 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 SCARB1Q8WTV0 552 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 RHOFQ9HBH0 211 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 ELOVL5Q9NYP7 299 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 COL6A6A6NMZ7 2263 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 NBEAQ8NFP9 2946 aa8.36□□□□□ -1.07
VTA1-205ENST00000620996 IGHV3-43A0A0B4J1X8 118 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 TUSC2O75896 110 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 IGHV3-13P01766 116 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 PET100P0DJ07 73 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 IGHV3-43DP0DP04 118 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 KLRB1Q12918 225 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 LY6DQ14210 128 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 HABP2Q14520 560 aaPredicted RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 NINJ1Q92982 152 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 WIPI2Q9Y4P8 454 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 OR2F2O95006 317 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 SLC25A4P12235 298 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 EPHA1P21709 976 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 TNFSF4P23510 183 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 PRDX2P32119 198 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 GLIPR1P48060 266 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 NKX6-1P78426 367 aaPredicted RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 CCL8P80075 99 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 OR2F1Q13607 317 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 FAM53AQ6NSI3 398 aaPredicted RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 MOB1BQ7L9L4 216 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 HSD17B13Q7Z5P4 300 aaPredicted RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 ZNF808Q8N4W9 903 aaPredicted RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 SLC35G3Q8N808 338 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 OR10V1Q8NGI7 309 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 ZCCHC14Q8WYQ9 949 aaKnown RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 DCTN5Q9BTE1 182 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 GGACTQ9BVM4 153 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 PARP12Q9H0J9 701 aaKnown RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 PCDHB10Q9UN67 800 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 OR2W1Q9Y3N9 320 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 PLCE1Q9P212 2302 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 DPRXA6NFQ7 191 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 H0YIZ8 118 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 CYB5R3P00387 301 aaPredicted RBP8.35□□□□□ -1.07
VTA1-205ENST00000620996 TMEM11P17152 192 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 UCP3P55916 312 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 ETV3LQ6ZN32 361 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 SMIM3Q9BZL3 60 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 ZNF835Q9Y2P0 537 aa8.35□□□□□ -1.07
VTA1-205ENST00000620996 RNF222A6NCQ9 220 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 DEFB108AA8MXU0 73 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 BCL2L11O43521 198 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 SNAPC5O75971 98 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 IGHV3-7P01780 117 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 OR4A8P0C604 315 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 ID4P47928 161 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 RNF212Q495C1 297 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 Q6ZS49 121 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 KCNRGQ8N5I3 272 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 OR52L2PQ8NGH6 319 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 C14orf79Q96F83 325 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 WFIKKN1Q96NZ8 548 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 DECR2Q9NUI1 292 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 ADGRG4Q8IZF6 3080 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 TRBV6-7A0A0A0MS04 114 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 NKX2-6A6NCS4 301 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 SERPINE2P07093 398 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 SNRPCP09234 159 aaKnown RBP8.34□□□□□ -1.07
VTA1-205ENST00000620996 PSG2P11465 335 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 IRF2P14316 349 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms