RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PSORS1C1Q9UIG5 152 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 MGAT4AQ9UM21 535 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 VSIG4Q9Y279 399 aa9.33□□□□□ -0.92
UPF3B-204ENST00000619445 A0A1W2PPK0 400 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 UBE2QL1A1L167 161 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
UPF3B-204ENST00000619445 SEC14L6B5MCN3 397 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 NBR2O15453 112 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 BPNT1O95861 308 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 F2RL1P55085 397 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 RNLSQ5VYX0 342 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 C11orf87Q6NUJ2 197 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF833PQ6ZTB9 187 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 AHSA2Q719I0 299 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 NANOGP1Q8N7R0 232 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 MRPL30Q8TCC3 161 aaKnown RBP9.32□□□□□ -0.92
UPF3B-204ENST00000619445 MYOZ3Q8TDC0 251 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 MND1Q9BWT6 205 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 TMEM59Q9BXS4 323 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 OR51J1Q9H342 316 aa9.32□□□□□ -0.92
UPF3B-204ENST00000619445 PNMA8CA0A1B0GUJ8 204 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 OR5H14A6NHG9 310 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 ITGB1BP1O14713 200 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 RAB29O14966 203 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 RBBP9O75884 186 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 SLC2A2P11168 524 aaPredicted RBP9.31□□□□□ -0.92
UPF3B-204ENST00000619445 CHATP28329 748 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 MC5RP33032 325 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 PPP1CCP36873 323 aaKnown RBP9.31□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF616Q08AN1 781 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 C5orf64Q2M2E5 130 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 NKAPLQ5M9Q1 402 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 C1orf100Q5SVJ3 147 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 C6orf141Q5SZD1 244 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 SIGIRRQ6IA17 410 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 LIN54Q6MZP7 749 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 NPBQ8NG41 125 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 OR11H1Q8NG94 326 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 FBLIM1Q8WUP2 373 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 EDARADDQ8WWZ3 215 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 RNF5Q99942 180 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 NABP2Q9BQ15 211 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 RNF150Q9ULK6 438 aa9.31□□□□□ -0.92
UPF3B-204ENST00000619445 TRAV41A0A0B4J266 112 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 ARPC1BO15143 372 aaKnown RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 NDUFA3O95167 84 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 IGLV1-40P01703 118 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 MYF6P23409 242 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 CD40LGP29965 261 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 PPIFP30405 207 aaKnown RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 RPS27AP62979 156 aaKnown RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 TMEM267Q0VDI3 215 aaPredicted RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 HMGN3Q15651 99 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 DEFB136Q30KP8 78 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 ACSM3Q53FZ2 586 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 FAM27D1Q5T7N8 215 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF660Q6AZW8 331 aaPredicted RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 PYHIN1Q6K0P9 492 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 FAM53AQ6NSI3 398 aaPredicted RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF429Q86V71 674 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 BPIFB6Q8NFQ5 453 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 OR52L2PQ8NGH6 319 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 DUX3Q96PT4 197 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 URM1Q9BTM9 101 aaKnown RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 TM2D1Q9BX74 207 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 MRPL20Q9BYC9 149 aaKnown RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 PARP11Q9NR21 331 aa9.3□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF256Q9Y2P7 627 aaPredicted RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 LSM4Q9Y4Z0 139 aaKnown RBP9.3□□□□□ -0.92
UPF3B-204ENST00000619445 SAA2-SAA4A0A096LPE2 208 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 SAA2P0DJI9 122 aaPredicted RBP9.29□□□□□ -0.92
UPF3B-204ENST00000619445 ECI1P42126 302 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 LUMP51884 338 aaPredicted RBP9.29□□□□□ -0.92
UPF3B-204ENST00000619445 CRIP2P52943 208 aaPredicted RBP9.29□□□□□ -0.92
UPF3B-204ENST00000619445 GABPB1Q06547 395 aaPredicted RBP9.29□□□□□ -0.92
UPF3B-204ENST00000619445 GNMTQ14749 295 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 RCN1Q15293 331 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF260Q3ZCT1 412 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 RBM48Q5RL73 367 aaKnown RBP9.29□□□□□ -0.92
UPF3B-204ENST00000619445 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 ZNF491Q8N8L2 437 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 MINDY2Q8NBR6 621 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 OR6M1Q8NGM8 313 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 OR1N2Q8NGR9 330 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 IL1F10Q8WWZ1 152 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 ANKRD60Q9BZ19 345 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 CHMP1AQ9HD42 196 aaPredicted RBP9.29□□□□□ -0.92
UPF3B-204ENST00000619445 FKBP14Q9NWM8 211 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 SCN3BQ9NY72 215 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 SLC23A1Q9UHI7 598 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 U3KQK5 164 aa9.29□□□□□ -0.92
UPF3B-204ENST00000619445 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 TRBV6-6A0A0A6YYG2 114 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 I3L521 148 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 CASQ2O14958 399 aaPredicted RBP9.28□□□□□ -0.92
UPF3B-204ENST00000619445 ATP6V0E1O15342 81 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 NAPSAO96009 420 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 CDK1P06493 297 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms