RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RNF7Q9UBF6 113 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 TNFSF18Q9UNG2 199 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 DOCK11Q5JSL3 2073 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 TRBV6-6A0A0A6YYG2 114 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 HMSDA8MTL9 139 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 GLAP06280 429 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 ACAA1P09110 424 aaPredicted RBP6.49□□□□□ -1.37
NEK3-207ENST00000617054 FAM74A1Q5RGS3 127 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 LPCAT3Q6P1A2 487 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 OR1S1Q8NH92 325 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 LILRB4Q8NHJ6 448 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 LILRB1Q8NHL6 650 aaPredicted RBP6.49□□□□□ -1.37
NEK3-207ENST00000617054 C2orf50Q96LR7 162 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 MAGT1Q9H0U3 335 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 RHOFQ9HBH0 211 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 NDRG3Q9UGV2 375 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 ST8SIA5O15466 376 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 PRB1P04280 392 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 LUMP51884 338 aaPredicted RBP6.49□□□□□ -1.37
NEK3-207ENST00000617054 UCP3P55916 312 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 MST1LQ2TV78 715 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 ZNF695Q8IW36 515 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 RNASE6Q93091 150 aaKnown RBP6.49□□□□□ -1.37
NEK3-207ENST00000617054 FAM122AQ96E09 287 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 NMES1Q9C002 83 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 FAM234AQ9H0X4 552 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 OR2D2Q9H210 308 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 DYNLRB1Q9NP97 96 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 KCNJ16Q9NPI9 418 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 ZNRD1Q9P1U0 126 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 FBXL7Q9UJT9 491 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 ARHGAP32A7KAX9 2087 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 A0A0B4J2A0 478 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 A0A0G2JRQ6 117 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 RLN2P04090 185 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 CD3EP07766 207 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 CTXN2P0C2S0 81 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 TNFSF4P23510 183 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 PRB3Q04118 309 aaPredicted RBP6.48□□□□□ -1.37
NEK3-207ENST00000617054 FGL1Q08830 312 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 MZT1Q08AG7 82 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 SRSF7Q16629 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
NEK3-207ENST00000617054 SLC35E4Q6ICL7 350 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 CMTM1Q8IZ96 169 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 INO80EQ8NBZ0 244 aaPredicted RBP6.48□□□□□ -1.37
NEK3-207ENST00000617054 GALNT14Q96FL9 552 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 C5orf30Q96GV9 206 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 CABLES2Q9BTV7 478 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 SMIM3Q9BZL3 60 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 SHPKQ9UHJ6 478 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 ZDHHC8Q9ULC8 765 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 OOEPA6NGQ2 149 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 RAMP3O60896 148 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 IFNA21P01568 189 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 MBPP02686 304 aaPredicted RBP6.48□□□□□ -1.37
NEK3-207ENST00000617054 SRSF2Q01130 221 aaKnown RBP6.48□□□□□ -1.37
NEK3-207ENST00000617054 SRSF4Q08170 494 aaKnown RBP6.48□□□□□ -1.37
NEK3-207ENST00000617054 HMGN3Q15651 99 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 LYPD2Q6UXB3 125 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 DRAM1Q8N682 238 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 BSCL2Q96G97 398 aaPredicted RBP6.48□□□□□ -1.37
NEK3-207ENST00000617054 C18orf12Q96KH6 178 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 DHRS9Q9BPW9 319 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 ZNF471Q9BX82 626 aaPredicted RBP6.48□□□□□ -1.37
NEK3-207ENST00000617054 PSG11Q9UQ72 335 aa6.48□□□□□ -1.37
NEK3-207ENST00000617054 TRAV20A0A0B4J274 112 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 ODAMA1E959 279 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 K7N7A8 449 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 IFNL4K9M1U5 179 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 ADAM20O43506 726 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 FCN3O75636 299 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 RP2O75695 350 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 MMP23AO75900 390 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 IRF2P14316 349 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 NDUFB7P17568 137 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 ZNF134P52741 427 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
NEK3-207ENST00000617054 IL15RAQ13261 267 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 CXorf66Q5JRM2 361 aaPredicted RBP6.47□□□□□ -1.37
NEK3-207ENST00000617054 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
NEK3-207ENST00000617054 LGI3Q8N145 548 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 CCDC71LQ8N9Z2 235 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 NGBQ9NPG2 151 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 H7C1Q1 480 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 F2RP25116 425 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 NFYBP25208 207 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 DLX1P56177 255 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 SHEQ5VZ18 495 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 GNG12Q9UBI6 72 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 FAM208BQ5VWN6 2430 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 MALRD1Q5VYJ5 2156 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 F5H0A9 414 aaPredicted RBP6.47□□□□□ -1.37
NEK3-207ENST00000617054 C15orf65H3BRN8 121 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 IGKV1-39P01597 117 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 IGKV1D-39P04432 117 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 SLC25A4P12235 298 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 CFHR2P36980 270 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms