RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ALKBH3Q96Q83 286 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 KCNK17Q96T54 332 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 MOB1AQ9H8S9 216 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 NCOA6Q14686 2063 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 E9PLN8 166 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 LILRA1O75019 489 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CBR3O75828 277 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 B4GALT1P15291 398 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SNAI3Q3KNW1 292 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZNF385AQ96PM9 386 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SLC35D1Q9NTN3 355 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TBL2Q9Y4P3 447 aaKnown RBP12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TMEM210A6NLX4 147 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ALG1L2C9J202 215 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SNAI2O43623 268 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 COX5AP20674 150 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 NOXO1Q8NFA2 376 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 FAM131CQ96AQ9 280 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CDH20Q9HBT6 801 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 GPR27Q9NS67 375 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CLN8Q9UBY8 286 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ACTL6BO94805 426 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 NAPSAO96009 420 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RELBQ01201 579 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 C17orf67Q0P5P2 114 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 HLA-DRB5Q30154 266 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 GPR146Q96CH1 333 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 YPEL4Q96NS1 127 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ENY2Q9NPA8 101 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 HEYLQ9NQ87 328 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 PTRH2Q9Y3E5 179 aaKnown RBP12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 VPS13AQ96RL7 3174 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ABCA7Q8IZY2 2146 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TNFSF13O75888 250 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 GABRA2P47869 451 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 NPBWR2P48146 333 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ATP5G3P48201 142 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RNASEKQ6P5S7 137 aaKnown RBP12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 OR10G8Q8NGN5 311 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 PP6455Q8WZ26 134 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 BCL2L2Q92843 193 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ANAPC16Q96DE5 110 aa12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 MRPS18CQ9Y3D5 142 aaKnown RBP12.06□□□□□ -0.48
TNFRSF11A-205ENST00000616710 F2Z2F3 143 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RPL36A-HNRNPH2H7BZ11 118 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CD38P28907 300 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 FXYD3Q14802 87 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 Q6ZWC4 215 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 C9orf40Q8IXQ3 194 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 OR8I2Q8N0Y5 310 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TCTEX1D1Q8N7M0 179 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZC2HC1AQ96GY0 325 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 FRG2CA6NGY1 282 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZNF732B4DXR9 585 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 PDCD6O75340 191 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RND2P52198 227 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 PINX1Q96BK5 328 aaKnown RBP12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 C18orf12Q96KH6 178 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 C1orf147Q96MC9 270 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZNF331Q9NQX6 463 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CACNA1GO43497 2377 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 IGKV1D-13A0A0B4J2D9 117 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 IGKV1-13P0DP09 117 aa12.05□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZDBF2Q9HCK1 2354 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 IGHV5-51A0A0C4DH38 117 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 VASH2Q86V25 355 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 OR4D5Q8NGN0 318 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CAMPP49913 170 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RPL24P83731 157 aaKnown RBP12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SHBQ15464 509 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 WDR74Q6RFH5 385 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZNF488Q96MN9 340 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ANAPC1Q9H1A4 1944 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ZIC3O60481 467 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CDC34P49427 236 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 GPM6AP51674 278 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 EXT1Q16394 746 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 GCSAMLQ5JQS6 135 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 LOXL4Q96JB6 756 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 Q96M66 194 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RAB40CQ96S21 281 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 NAA38Q9BRA0 125 aaKnown RBP12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 GAL3ST2Q9H3Q3 398 aa12.04□□□□□ -0.48
TNFRSF11A-205ENST00000616710 ODAMA1E959 279 aa12.03□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
TNFRSF11A-205ENST00000616710 RPP25LQ8N5L8 163 aaKnown RBP12.03□□□□□ -0.48
TNFRSF11A-205ENST00000616710 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.48
TNFRSF11A-205ENST00000616710 PRUNE2Q8WUY3 3088 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms