RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 UBE2G1P62253 170 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 TMEM147Q9BVK8 224 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 TM2D1Q9BX74 207 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 GAL3ST2Q9H3Q3 398 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF716A6NP11 495 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 H0Y980 276 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 TNXAQ16473 311 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 C1QTNF5Q9BXJ0 243 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 SLC2A8Q9NY64 477 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 OR6C3Q9NZP0 311 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 SLC25A10Q9UBX3 287 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 hADV38S2A0JD32 116 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 OR2A4O95047 310 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 CDC34P49427 236 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 DLK1P80370 383 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 C9orf106Q8NAJ2 232 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 MARS2Q96GW9 593 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 OR2A7Q96R45 310 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 A0A1B0GU03 582 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 BTBD17A6NE02 478 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 FAM74A7A6NL05 159 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 C16orf97H3BN30 126 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 CD3EP07766 207 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 FGF2P09038 288 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 CHRNA7P36544 502 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 FAM74A3Q4VXF1 159 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 CMTM2Q8TAZ6 248 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 C12orf57Q99622 126 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 TNFRSF19Q9NS68 423 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF320A2RRD8 509 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 YIF1AO95070 293 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 F2RP25116 425 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 PRB3Q04118 309 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF385CQ66K41 422 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 ACSM6Q6P461 480 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 NIT2Q9NQR4 276 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 HSF4Q9ULV5 492 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF835Q9Y2P0 537 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 ARHGEF17Q96PE2 2063 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 LOC390937A0A1W2PQ73 354 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 PPP5D1E7EU14 171 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 NPBWR1P48145 328 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 THBS3P49746 956 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 RPL11P62913 178 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 RIPPLY2Q5TAB7 128 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 OR10A7Q8NGE5 316 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 HSD17B10Q99714 261 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 SEC11CQ9BY50 192 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 PARP11Q9NR21 331 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 CDX4O14627 284 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 PPP1R2P9O14990 202 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 S1PR2O95136 353 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 ACSF3Q4G176 576 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 NUDT16L1Q9BRJ7 211 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 DCTN5Q9BTE1 182 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 FOXD3Q9UJU5 478 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 NPTNQ9Y639 398 aa7.62□□□□□ -1.19
PDLIM5-222ENST00000615540 IGHV3-72A0A0B4J1Y9 119 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 CCL21O00585 134 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 SRSF10O75494 262 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 ABHD14AQ9BUJ0 271 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 LINC00470Q9BZP3 86 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 SLC35D1Q9NTN3 355 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 TRAV38-1A0A0B4J264 116 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 FAM157AC9JC47 383 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 FAM27E3Q08E93 113 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 SMUG1Q53HV7 270 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 LY6G6FQ5SQ64 297 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 DBX2Q6ZNG2 339 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 OR1B1Q8NGR6 318 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 RPEQ96AT9 228 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 OR51B2Q9Y5P1 312 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 DOCK8Q8NF50 2099 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 CNTRLQ7Z7A1 2325 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 RPS2P15880 293 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 BPIFB3P59826 476 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 SPNS3Q6ZMD2 512 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 BMPERQ8N8U9 685 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 OR4S2Q8NH73 311 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 BCL2L2Q92843 193 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 TCEAL7Q9BRU2 100 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 HIF1ANQ9NWT6 349 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 HRASP01112 189 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF883P0CG24 379 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 VMA21Q3ZAQ7 101 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 TMEM230Q96A57 120 aa7.61□□□□□ -1.19
PDLIM5-222ENST00000615540 PQLC2LA1A4F0 135 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 WNT5AP41221 380 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ERVFC1-1P60608 527 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 CSRP2Q16527 193 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 RPL39P5Q59GN2 51 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 NCMAPQ5T1S8 102 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 CD8AP01732 235 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ORM2P19652 201 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 TAS2R45P59539 299 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNRF1Q8ND25 227 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 SAT2Q96F10 170 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms