RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 TAS2R30P59541 319 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 RPL23AP62750 156 aaKnown RBP7.55□□□□□ -1.2
VPS11-206ENST00000614944 LTC4SQ16873 150 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 SLC25A35Q3KQZ1 300 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 PHYHD1Q5SRE7 291 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 PPP1R35Q8TAP8 253 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 ZNRF4Q8WWF5 429 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 CLCF1Q9UBD9 225 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 NAT8Q9UHE5 227 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 MYO15AQ9UKN7 3530 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 SS18L1O75177 396 aaPredicted RBP7.55□□□□□ -1.2
VPS11-206ENST00000614944 PTH2RP49190 550 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 CLRN1P58418 232 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 MRPS34P82930 218 aaKnown RBP7.55□□□□□ -1.2
VPS11-206ENST00000614944 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 SLC25A21Q9BQT8 299 aaPredicted RBP7.55□□□□□ -1.2
VPS11-206ENST00000614944 SPRR3Q9UBC9 169 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 ST6GALNAC2Q9UJ37 374 aa7.55□□□□□ -1.2
VPS11-206ENST00000614944 LMO1P25800 156 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 RPL32P62910 135 aaKnown RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 MIDNQ504T8 468 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 SPIN3Q5JUX0 258 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 SLC18B1Q6NT16 456 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 MRGPRGQ86SM5 289 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 SAXO1Q8IYX7 474 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 CHST4Q8NCG5 386 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 ZMYND19Q96E35 227 aaPredicted RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 PSG8Q9UQ74 426 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 WIPI2Q9Y4P8 454 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 CXCL13O43927 109 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 SLC16A7O60669 478 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 HAND1O96004 215 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 SRPXP78539 464 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 KRTAP27-1Q3LI81 207 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 KCTD18Q6PI47 426 aaPredicted RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 ZNF709Q8N972 641 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 RNF133Q8WVZ7 376 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 RNF166Q96A37 237 aaPredicted RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 SCRT1Q9BWW7 348 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 TRBV24-1A0A075B6N3 115 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 A0A0G2JK05 382 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 FAM166BA8MTA8 275 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 M0QXV9 152 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 SRSF10O75494 262 aaKnown RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 CSN2P05814 226 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 CELA3AP09093 270 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 CD34P28906 385 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 GPR6P46095 362 aaPredicted RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 P2RY6Q15077 328 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 CARD17Q5XLA6 110 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 LINC00346Q8IVM7 164 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 ZNF101Q8IZC7 436 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 OR10X1Q8NGY0 326 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 GMPPAQ96IJ6 420 aaPredicted RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 MOB1AQ9H8S9 216 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 TAF9BQ9HBM6 251 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 SRA1Q9HD15 236 aaKnown RBP7.54□□□□□ -1.2
VPS11-206ENST00000614944 FUT9Q9Y231 359 aa7.54□□□□□ -1.2
VPS11-206ENST00000614944 IGHV1-69-2A0A0G2JMI3 117 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 ODAMA1E959 279 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 SLC33A1O00400 549 aaPredicted RBP7.53□□□□□ -1.2
VPS11-206ENST00000614944 CHRM2P08172 466 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 GNB3P16520 340 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 SSTR5P35346 364 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 ATP5IP56385 69 aaPredicted RBP7.53□□□□□ -1.2
VPS11-206ENST00000614944 CLDN17P56750 224 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 UBE2NLQ5JXB2 153 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 SPATA46Q5T0L3 261 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 Q6ZSR3 168 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 OR52N5Q8NH56 324 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 NABP1Q96AH0 204 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 SMIM19Q96E16 107 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 SRD5A3Q9H8P0 318 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 MED29Q9NX70 200 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 MRM2Q9UI43 246 aaKnown RBP7.53□□□□□ -1.2
VPS11-206ENST00000614944 JPT1Q9UK76 154 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 UBE2J1Q9Y385 318 aaPredicted RBP7.53□□□□□ -1.2
VPS11-206ENST00000614944 ATP23Q9Y6H3 246 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 UPK3AO75631 287 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 CFPP27918 469 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 PYCR1P32322 319 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 PIGPP57054 158 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 CDK5R1Q15078 307 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 TP53I3Q53FA7 332 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 C5orf47Q569G3 176 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 FAM27BQ5VT28 67 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 AMMECR1LQ6DCA0 310 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 PPP1R14AQ96A00 147 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 TVP23CQ96ET8 276 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 PELI1Q96FA3 418 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 PLK3Q9H4B4 646 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 SMDT1Q9H4I9 107 aa7.53□□□□□ -1.2
VPS11-206ENST00000614944 NOP16Q9Y3C1 178 aaKnown RBP7.53□□□□□ -1.2
VPS11-206ENST00000614944 UFC1Q9Y3C8 167 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms