RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 OR52W1Q6IF63 320 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 ZNF596Q8TC21 504 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 WIPF2Q8TF74 440 aaPredicted RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 CPNE2Q96FN4 548 aaPredicted RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM103A1Q9BTL3 118 aaKnown RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 ST6GALNAC5Q9BVH7 336 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 Q9N2K0 584 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A18PA6NE21 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A16PA6NEW6 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A20PA6NIJ5 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A9PA6NNJ1 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A12PA8MX19 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A5PA8MXJ8 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 G3V318 75 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 G3V4G9 280 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FCGR3AP08637 254 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A15PP0C7V4 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A13PP0C7W8 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A14PP0C7W9 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FAM90A24PP0C7X0 464 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 FGF9P31371 208 aaPredicted RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 DEFB136Q30KP8 78 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 MINOS1Q5TGZ0 78 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 ZNF880Q6PDB4 577 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 GDPGP1Q6ZNW5 385 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 OR10R2Q8NGX6 335 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 RAB3CQ96E17 227 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 MRPS24Q96EL2 167 aaKnown RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 RBM14Q96PK6 669 aaKnown RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 CMSS1Q9BQ75 279 aaKnown RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 C11orf54Q9H0W9 315 aaPredicted RBP4.51□□□□□ -1.69
CPNE3-208ENST00000614678 Q9H521 79 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 MINOS1-NBL1R4GNA1 71 aa4.51□□□□□ -1.69
CPNE3-208ENST00000614678 ORC5O43913 435 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 CT45A6P0DMU7 189 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 CT45A5P0DMU8 189 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 CT45A7P0DMV0 189 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 TMEM11P17152 192 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 NFYAP23511 347 aaPredicted RBP4.5□□□□□ -1.69
CPNE3-208ENST00000614678 MYL9P24844 172 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 KIR2DS4P43632 304 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 PRRX1P54821 245 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 PJVKQ0ZLH3 352 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 CDNFQ49AH0 187 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 OXLD1Q5BKU9 147 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 RNASE12Q5GAN4 147 aaKnown RBP4.5□□□□□ -1.69
CPNE3-208ENST00000614678 C11orf88Q6PI97 169 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 CDH26Q8IXH8 852 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 C5orf56Q8N8D9 126 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 Q8N9W7 124 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 OR5R1Q8NH85 324 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 CLCC1Q96S66 551 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 ABHD14AQ9BUJ0 271 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 C16orf95Q9H693 158 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 ZNF107Q9UII5 783 aaPredicted RBP4.5□□□□□ -1.69
CPNE3-208ENST00000614678 GAB2Q9UQC2 676 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 IGKV1D-13A0A0B4J2D9 117 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 TFAP2AP05549 437 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 IGKV1-13P0DP09 117 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 GPR107Q5VW38 600 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 SHISA2Q6UWI4 295 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 FAM131AQ6UXB0 335 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 IDO2Q6ZQW0 420 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 C19orf35Q6ZS72 473 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 LINC00596Q86U02 117 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 OR2T6Q8NHC8 308 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 WNT10AQ9GZT5 417 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 SSR3Q9UNL2 185 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 FUOMA2VDF0 154 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 NOTOA8MTQ0 251 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 AIREO43918 545 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 OR8U9P0C7N5 309 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 HIST1H1DP16402 221 aaKnown RBP4.5□□□□□ -1.69
CPNE3-208ENST00000614678 OR2B11Q5JQS5 317 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 TREML4Q6UXN2 200 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 OR8U1Q8NH10 309 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 GALMQ96C23 342 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 RDH8Q9NYR8 311 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 WSB1Q9Y6I7 421 aa4.5□□□□□ -1.69
CPNE3-208ENST00000614678 SERPINE3A8MV23 424 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 SPINT2O43291 252 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 IGLV2-14P01704 120 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 EIF4EP06730 217 aaKnown RBP4.49□□□□□ -1.69
CPNE3-208ENST00000614678 CTF1Q16619 201 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 Q8N6K4 173 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 OR5AU1Q8NGC0 362 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 OR4C13Q8NGP0 309 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 KCTD7Q96MP8 289 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 NABP2Q9BQ15 211 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 NPFFR1Q9GZQ6 430 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 KLK15Q9H2R5 256 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 MMP24Q9Y5R2 645 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 TRAV18A0A075B6X5 111 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 SRRM4A7MD48 611 aaKnown RBP4.49□□□□□ -1.69
CPNE3-208ENST00000614678 LINC00473A8K010 186 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 LSAMPQ13449 338 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 ZNF260Q3ZCT1 412 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 ARSJQ5FYB0 599 aaPredicted RBP4.49□□□□□ -1.69
CPNE3-208ENST00000614678 OR2W3Q7Z3T1 314 aa4.49□□□□□ -1.69
CPNE3-208ENST00000614678 TGIF2LXQ8IUE1 241 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms