RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 THNSL2Q86YJ6 484 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 IL22RA2Q969J5 263 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 ANAPC16Q96DE5 110 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 PRSS50Q9UI38 385 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 MRPS18CQ9Y3D5 142 aaKnown RBP18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 USP24Q9UPU5 2620 aa18.73■□□□□ 0.59
POLR2J3-220ENST00000613744 H7BYZ3 331 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 HRASP01112 189 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 ANOS1P23352 680 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 OR3A1P47881 315 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 PCP4P48539 62 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 PMP22Q01453 160 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 MPV17LQ2QL34 196 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 NMSQ5H8A3 153 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 IGFL3Q6UXB1 125 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 OR2M7Q8NG81 312 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 ZNF665Q9H7R5 613 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 ARID1AO14497 2285 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 RFPL3SP0C7P2 107 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 MDKP21741 143 aaPredicted RBP18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 VDAC1P21796 283 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 AADACP22760 399 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 MSX1P28360 303 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 SRP14P37108 136 aaKnown RBP18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 MEOX1P50221 254 aa18.72■□□□□ 0.59
POLR2J3-220ENST00000613744 IGLV3-32A0A0A0MS00 114 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 KBTBD11O94819 623 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 PPYP01298 95 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 FAHP16930 419 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 IDH3GP51553 393 aaPredicted RBP18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 SERF2P84101 59 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 HIST3H3Q16695 136 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 BSXQ3C1V8 233 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 CXorf66Q5JRM2 361 aaPredicted RBP18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 PIGTQ969N2 578 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 RYDENQ9NUL5 291 aaKnown RBP18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 PIGLQ9Y2B2 252 aa18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 KLF13Q9Y2Y9 288 aaPredicted RBP18.71■□□□□ 0.59
POLR2J3-220ENST00000613744 TRAV17A0A0B4J275 112 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 ADAM20O43506 726 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 GLI4P10075 376 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 CDAP32320 146 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 ZNF154Q13106 437 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 LY6DQ14210 128 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 TMEM211Q6ICI0 200 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 ZNF774Q6NX45 483 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 TMEM217Q8N7C4 229 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 FADS6Q8N9I5 356 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 FAM173AQ9BQD7 235 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 RPRMQ9NS64 109 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 NAGKQ9UJ70 344 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 POLR3KQ9Y2Y1 108 aaPredicted RBP18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 PRRC2CQ9Y520 2896 aaKnown RBP18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 LRRC3CA6NJW4 275 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 FAM166BA8MTA8 275 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 E9PLN8 166 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 TMEM50AO95807 157 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 ADIRFQ15847 76 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 PLPPR5Q32ZL2 321 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 TMEM178AQ8NBL3 297 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 SCGB1C1Q8TD33 95 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 PINX1Q96BK5 328 aaKnown RBP18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 SMIM7Q9BQ49 75 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 OR6C3Q9NZP0 311 aa18.7■□□□□ 0.58
POLR2J3-220ENST00000613744 TMEM250H0YL14 139 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 TRAF3IP2O43734 574 aaPredicted RBP18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 SLC25A6P12236 298 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 RNPS1Q15287 305 aaKnown RBP18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 SLC25A24Q6NUK1 477 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 PLPPR1Q8TBJ4 325 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 C20orf144Q9BQM9 153 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 PARD6GQ9BYG4 376 aaPredicted RBP18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 MAGT1Q9H0U3 335 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 RNF115Q9Y4L5 304 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 NCKAP5O14513 1909 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 KLRC4-KLRK1H3BQV0 150 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 GZMHP20718 246 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 LCN2P80188 198 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 MRPS11P82912 194 aaKnown RBP18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 PLGLB1Q02325 96 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 SLC25A53Q5H9E4 307 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 Q6ZS92 163 aa18.69■□□□□ 0.58
POLR2J3-220ENST00000613744 CEBPZOSA8MTT3 80 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 CHST1O43916 411 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 CNN1P51911 297 aaKnown RBP18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 PAX9P55771 341 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 HIST1H3AP68431 136 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 CNN3Q15417 329 aaKnown RBP18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 Q6ZS49 121 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 TBC1D26Q86UD7 250 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 GJC3Q8NFK1 279 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 RAB40CQ96S21 281 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 TTTY12Q9BZ98 90 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 OR51I2Q9H344 312 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 IL36GQ9NZH8 169 aa18.68■□□□□ 0.58
POLR2J3-220ENST00000613744 SCGB1D1O95968 90 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 OPN1LWP04000 364 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 RANP62826 216 aaKnown RBP18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 SRSF7Q16629 238 aaKnown RBP eCLIP18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 OR2T10Q8NGZ9 312 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms