RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TNFRSF1AP19438 455 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 GNLYP22749 145 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 SLC25A1P53007 311 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 HSPB2Q16082 182 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 TOMM20LQ6UXN7 152 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 ZDHHC22Q8N966 263 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 RPUSD4Q96CM3 377 aaKnown RBP9.34□□□□□ -0.91
FAM3A-221ENST00000612856 MRPL37Q9BZE1 423 aaKnown RBP9.34□□□□□ -0.91
FAM3A-221ENST00000612856 A0A1B0GTI1 187 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 RBFOX3A6NFN3 312 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 AHRRA9YTQ3 701 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 DHRS3O75911 302 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 SFT2D2O95562 160 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 SNCAP37840 140 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
FAM3A-221ENST00000612856 ANKRD55Q3KP44 614 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 OSR2Q8N2R0 312 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 ERGIC1Q969X5 290 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF2Q9BSG1 426 aaPredicted RBP9.34□□□□□ -0.91
FAM3A-221ENST00000612856 PCGF1Q9BSM1 259 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 NMES1Q9C002 83 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 PRDM13Q9H4Q3 707 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 FREM2Q5SZK8 3169 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 HMGB3O15347 200 aaKnown RBP9.33□□□□□ -0.92
FAM3A-221ENST00000612856 SIAH2O43255 324 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 EFNA2O43921 213 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 ONECUT2O95948 504 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 CYTL1Q9NRR1 136 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 GPR27Q9NS67 375 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 PAM16Q9Y3D7 125 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 TNCP24821 2201 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 FCGR3AP08637 254 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 RAB4AP20338 218 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 MMP16P51512 607 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 SNAI3Q3KNW1 292 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 PIGYQ3MUY2 71 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 ACSF3Q4G176 576 aaPredicted RBP9.33□□□□□ -0.92
FAM3A-221ENST00000612856 FAHD2BQ6P2I3 314 aaPredicted RBP9.33□□□□□ -0.92
FAM3A-221ENST00000612856 OR10J5Q8NHC4 309 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 TMEM18Q96B42 140 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 FAHD2AQ96GK7 314 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 SF3B5Q9BWJ5 86 aaKnown RBP9.33□□□□□ -0.92
FAM3A-221ENST00000612856 NMNAT2Q9BZQ4 307 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 CLPSP04118 112 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 HNF1AP20823 631 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 PTTG1IPP53801 180 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 TMEM268Q5VZI3 342 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 TMEM171Q8WVE6 324 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 SMIM8Q96KF7 97 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 RNF122Q9H9V4 155 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 RAB18Q9NP72 206 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 RFNGQ9Y644 331 aa9.33□□□□□ -0.92
FAM3A-221ENST00000612856 A0A1W2PNV4 684 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 CTSSP25774 331 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 CDKN1AP38936 164 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 REG1BP48304 166 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 PAX5Q02548 391 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 PRSS35Q8N3Z0 413 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 NKAIN3Q8N8D7 197 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 SORL1Q92673 2214 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 MRPL24Q96A35 216 aaKnown RBP9.32□□□□□ -0.92
FAM3A-221ENST00000612856 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
FAM3A-221ENST00000612856 NTNG2Q96CW9 530 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 ELOA3CA0A087WX78 387 aaPredicted RBP9.32□□□□□ -0.92
FAM3A-221ENST00000612856 SOCS1O15524 211 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 CD5P06127 495 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 KIR3DL2P43630 455 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 TFPI2P48307 235 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 ARL6IP1Q15041 203 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 ARHGEF39Q8N4T4 335 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 PERPQ96FX8 193 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 TXN2Q99757 166 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 TUBA4BQ9H853 241 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 SPRR3Q9UBC9 169 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 FAM24AA6NFZ4 105 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 NCBP2LA6PVI3 153 aaKnown RBP9.32□□□□□ -0.92
FAM3A-221ENST00000612856 CLDN34H7C241 214 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 RPLP1P05386 114 aaKnown RBP9.32□□□□□ -0.92
FAM3A-221ENST00000612856 ZNF728P0DKX0 622 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 HKR1P10072 659 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 COX6B1P14854 86 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 NBL1P41271 181 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 FGF8P55075 233 aaPredicted RBP9.32□□□□□ -0.92
FAM3A-221ENST00000612856 HEPN1Q6WQI6 88 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 MOB3BQ86TA1 216 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 FAM58AQ8N1B3 248 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 LYG1Q8N1E2 194 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 ZNF709Q8N972 641 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 GPHA2Q96T91 129 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 NDUFAF3Q9BU61 184 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 CHRNA10Q9GZZ6 450 aa9.32□□□□□ -0.92
FAM3A-221ENST00000612856 LY6HO94772 140 aa9.31□□□□□ -0.92
FAM3A-221ENST00000612856 OR4A8P0C604 315 aa9.31□□□□□ -0.92
FAM3A-221ENST00000612856 OR5H8P0DN80 308 aa9.31□□□□□ -0.92
FAM3A-221ENST00000612856 MPV17LQ2QL34 196 aa9.31□□□□□ -0.92
FAM3A-221ENST00000612856 SMIM21Q3B7S5 101 aa9.31□□□□□ -0.92
FAM3A-221ENST00000612856 BTNL8Q6UX41 500 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms