RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZFP57Q9NU63 452 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 PRELID3BQ9Y3B1 194 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 TRBV6-6A0A0A6YYG2 114 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 IGHG3P01860 377 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 MRPL49Q13405 166 aaKnown RBP11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 LINC00596Q86U02 117 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 LINC00469Q8N7U9 141 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 VSIRQ9H7M9 311 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 IQCF6A8MYZ5 107 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 ARG1P05089 322 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 RAC2P15153 192 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 SSTR5P35346 364 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 RPL30P62888 115 aaKnown RBP11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 TLE1Q04724 770 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF816Q0VGE8 651 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 PEA15Q15121 130 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 SPSB3Q6PJ21 355 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 LRP11Q86VZ4 500 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
PCDHGA3-202ENST00000612467 RELNP78509 3460 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 C12orf77C9JDV5 145 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 PRSS44E7EML9 344 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 SH2D1BO14796 132 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 TIMM8AO60220 97 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 H2AFB1P0C5Y9 115 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 GUSBP1Q15486 140 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 POLDIP2Q9Y2S7 368 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 CLEC18AA5D8T8 446 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 COLCA2A8K830 154 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 UMAD1C9J7I0 102 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 K7EM74 188 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 GABRA2P47869 451 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 GLIPR1P48060 266 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF146Q15072 292 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 HAPLN4Q86UW8 402 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 CLEC18CQ8NCF0 446 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 COQ2Q96H96 371 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR2D2Q9H210 308 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 NDRG3Q9UGV2 375 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 ACACAQ13085 2346 aa11.84□□□□□ -0.51
PCDHGA3-202ENST00000612467 HEXAP06865 529 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 LMO1P25800 156 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 HOXC12P31275 282 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZNF266Q14584 549 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 SLC25A31Q9H0C2 315 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 KLF2Q9Y5W3 355 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 PUS1Q9Y606 427 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 C7orf77A4D0Y5 90 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 KRASP01116 189 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 IGKV3-15P01624 115 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 EDDM3AQ14507 147 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 INO80CQ6PI98 192 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 WDR82Q6UXN9 313 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 SFT2D1Q8WV19 159 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 ABHD14BQ96IU4 210 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 DUSP13Q9UII6 198 aa11.83□□□□□ -0.52
PCDHGA3-202ENST00000612467 A0A1W2PPE2 198 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 A0A1W2PPH5 198 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 TNFSF13O75888 250 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 G6PCP35575 357 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 ACSF3Q4G176 576 aaPredicted RBP11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 VHLLQ6RSH7 139 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 OR8G5Q8NG78 346 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 MBNL3Q9NUK0 354 aaKnown RBP11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 IGHV3OR15-7A0A075B7D8 119 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 IGHV1-18A0A0C4DH31 117 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 CBR1P16152 277 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 EGR1P18146 543 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 HMGN3Q15651 99 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 SPANXN5Q5MJ07 72 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 SSX7Q7RTT5 188 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 OR13A1Q8NGR1 328 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 KCNJ16Q9NPI9 418 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 MUC6Q6W4X9 2439 aa11.82□□□□□ -0.52
PCDHGA3-202ENST00000612467 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 HBZP02008 142 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZNF83P51522 516 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 FGF8P55075 233 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 COL10A1Q03692 680 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 UTF1Q5T230 341 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 KPTNQ9Y664 436 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 PTPRBP23467 1997 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 TRAV17A0A0B4J275 112 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 hCG_1809904A0A1W2PP81 198 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 A0A1W2PR64 198 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 A0A1W2PRV1 198 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 OR5H1A6NKK0 313 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 CD55P08174 381 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 S100GP29377 79 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 IL2RGP31785 369 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 BRWD1-AS2P59051 145 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 KRBOX4Q5JUW0 171 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 FAM201AQ5SY85 155 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms