RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 KIAA1324LA8MWY0 1029 aaPredicted RBP12.42□□□□□ -0.42
CDH1-213ENST00000612417 TNFSF12O43508 249 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 RHBDL1O75783 438 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 CST7O76096 145 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 AGAP20933 346 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 CA6P23280 308 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 UBE2NP61088 152 aaKnown RBP12.42□□□□□ -0.42
CDH1-213ENST00000612417 OR2T2Q6IF00 324 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 Q6ZT83 130 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 MDP1Q86V88 176 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 Q8IYB0 196 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
CDH1-213ENST00000612417 RAB40CQ96S21 281 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 ERRFI1Q9UJM3 462 aaPredicted RBP12.42□□□□□ -0.42
CDH1-213ENST00000612417 CBY1Q9Y3M2 126 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 RFNGQ9Y644 331 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 A0A0G2JRQ6 117 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 A0A1W2PR80 420 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 MED19A0JLT2 244 aaPredicted RBP12.42□□□□□ -0.42
CDH1-213ENST00000612417 GPR37O15354 613 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 SULT1A1P50225 295 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 SOHLH1Q5JUK2 328 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 ZNF561Q8N587 486 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 CISD2Q8N5K1 135 aaKnown RBP12.42□□□□□ -0.42
CDH1-213ENST00000612417 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 GPR146Q96CH1 333 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 RTL8AQ9BWD3 113 aa12.42□□□□□ -0.42
CDH1-213ENST00000612417 UNKLQ9H9P5 680 aaKnown RBP12.42□□□□□ -0.42
CDH1-213ENST00000612417 TXNL1O43396 289 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 DFFBO76075 338 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 IGLV2-14P01704 120 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 S100A8P05109 93 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 SERPINE2P07093 398 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 FAM87AP0C7U9 286 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 EPHA1P21709 976 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 MAS1LP35410 378 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 UCNP55089 124 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 ERVK11-1P61568 191 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 CCL20P78556 96 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 ZNF497Q6ZNH5 498 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 MALSU1Q96EH3 234 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 RARRES2Q99969 163 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 ABHD14AQ9BUJ0 271 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 OR51M1Q9H341 326 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 PROCRQ9UNN8 238 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 WSB1Q9Y6I7 421 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 BSNQ9UPA5 3926 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 WDR1O75083 606 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 PSG2P11465 335 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 TAS2R30P59541 319 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
CDH1-213ENST00000612417 ZNF154Q13106 437 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 TESK1Q15569 626 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 TBC1D28Q2M2D7 210 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 C1orf185Q5T7R7 199 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 TMEM217Q8N7C4 229 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 CD300LFQ8TDQ1 290 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 OR51B6Q9H340 312 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 POLDIP2Q9Y2S7 368 aa12.41□□□□□ -0.42
CDH1-213ENST00000612417 PIEZO1Q92508 2521 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 A0A1W2PPH5 198 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 MBD3L4A6NDZ8 208 aaPredicted RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 MBD3L3A6NE82 208 aaPredicted RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 MBD3L5A6NJ08 208 aaPredicted RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 CNOT4O95628 575 aaKnown RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 S100A9P06702 114 aaKnown RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 OR13C7P0DN81 318 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 ZNF14P17017 642 aaPredicted RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 HOXC12P31275 282 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 SEM1Q6ZVN7 128 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 WDR86Q86TI4 376 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 OR51H1Q8NH63 302 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 MBD3L2Q8NHZ7 208 aaPredicted RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 RBMXL1Q96E39 390 aaKnown RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 C20orf24Q9BUV8 137 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 OPN3Q9H1Y3 402 aaPredicted RBP12.4□□□□□ -0.42
CDH1-213ENST00000612417 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 OR1A1Q9P1Q5 309 aa12.4□□□□□ -0.42
CDH1-213ENST00000612417 TRAV1-1A0A0B4J248 108 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 A0A1B0GV50 99 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 A6NLC8 198 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 SLC33A1O00400 549 aaPredicted RBP12.39□□□□□ -0.43
CDH1-213ENST00000612417 IGKV1-39P01597 117 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 HBE1P02100 147 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 IGKV1D-39P04432 117 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 RAB5AP20339 215 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 CD200P41217 278 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 RUNX1Q01196 453 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 TLE4Q04727 773 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 GABRA6Q16445 453 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 AKR1C8PQ5T2L2 129 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 ZNF610Q8N9Z0 462 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 ISOC2Q96AB3 205 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 STARD4Q96DR4 205 aa12.39□□□□□ -0.43
CDH1-213ENST00000612417 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
CDH1-213ENST00000612417 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms