RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KCNIP4Q6PIL6 250 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 OR2T10Q8NGZ9 312 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 OR5P3Q8WZ94 311 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 MISP3Q96FF7 219 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 OCIAD1Q9NX40 245 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 IL36RNQ9UBH0 155 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 MPC1Q9Y5U8 109 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 REV3LO60673 3130 aa18.99■□□□□ 0.63
SHANK2-220ENST00000608988 TRAV24A0A0B4J272 114 aa18.98■□□□□ 0.63
SHANK2-220ENST00000608988 ELLP55199 621 aaPredicted RBP18.98■□□□□ 0.63
SHANK2-220ENST00000608988 C20orf204Q6ZNR8 217 aa18.98■□□□□ 0.63
SHANK2-220ENST00000608988 RPP25LQ8N5L8 163 aaKnown RBP18.98■□□□□ 0.63
SHANK2-220ENST00000608988 OR2Y1Q8NGV0 311 aa18.98■□□□□ 0.63
SHANK2-220ENST00000608988 TMEM147Q9BVK8 224 aa18.98■□□□□ 0.63
SHANK2-220ENST00000608988 DDA1Q9BW61 102 aa18.98■□□□□ 0.63
SHANK2-220ENST00000608988 HSPB6O14558 160 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 IGHEP01854 428 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 CD99P14209 185 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 IQCJQ1A5X6 159 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 BEND4Q6ZU67 534 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 FAM58AQ8N1B3 248 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 PARLQ9H300 379 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 DLL3Q9NYJ7 618 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 OR6C3Q9NZP0 311 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 SYNGR1O43759 233 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 KLF7O75840 302 aaPredicted RBP18.97■□□□□ 0.63
SHANK2-220ENST00000608988 IGLV2-14P01704 120 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 GZMHP20718 246 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 TESK1Q15569 626 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 ZNF585BQ52M93 769 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 SPANXN5Q5MJ07 72 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.97■□□□□ 0.63
SHANK2-220ENST00000608988 DMRTC2Q8IXT2 367 aaPredicted RBP18.97■□□□□ 0.63
SHANK2-220ENST00000608988 NEU1Q99519 415 aa18.97■□□□□ 0.63
SHANK2-220ENST00000608988 MED12Q93074 2177 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 UBE2L5PA0A1B0GUS4 154 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 LRRC3CA6NJW4 275 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 B4E171 279 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 CD55P08174 381 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 JMJD7P0C870 316 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 MDKP21741 143 aaPredicted RBP18.96■□□□□ 0.63
SHANK2-220ENST00000608988 TSPAN7P41732 249 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 IDH3GP51553 393 aaPredicted RBP18.96■□□□□ 0.63
SHANK2-220ENST00000608988 GNG3P63215 75 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 ARF1P84077 181 aaKnown RBP18.96■□□□□ 0.63
SHANK2-220ENST00000608988 MSMO1Q15800 293 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 SPEM1Q8N4L4 309 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 NEIL1Q96FI4 390 aaPredicted RBP18.96■□□□□ 0.63
SHANK2-220ENST00000608988 IMMP2LQ96T52 175 aa18.96■□□□□ 0.63
SHANK2-220ENST00000608988 RTTNQ86VV8 2226 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 MRPL33O75394 65 aaKnown RBP18.95■□□□□ 0.62
SHANK2-220ENST00000608988 TUBG1P23258 451 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 ERVS71-1P61550 626 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 IZUMO4Q1ZYL8 232 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 ABCA7Q8IZY2 2146 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 ZBTB34Q8NCN2 500 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 RPUSD4Q96CM3 377 aaKnown RBP18.95■□□□□ 0.62
SHANK2-220ENST00000608988 PCGF1Q9BSM1 259 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 WNT16Q9UBV4 365 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 HSPB7Q9UBY9 170 aa18.95■□□□□ 0.62
SHANK2-220ENST00000608988 ANKRD30BLA7E2S9 258 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 GYPAP02724 150 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 ARR3P36575 388 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 NUTF2P61970 127 aaKnown RBP18.94■□□□□ 0.62
SHANK2-220ENST00000608988 P2RY6Q15077 328 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 USF2Q15853 346 aaPredicted RBP18.94■□□□□ 0.62
SHANK2-220ENST00000608988 C17orf78Q8N4C9 275 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 MYO9BQ13459 2157 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 C5orf49A4QMS7 147 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 TCAPO15273 167 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 COX5AP20674 150 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 TNFRSF9Q07011 255 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 RDH5Q92781 318 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 PHF7Q9BWX1 381 aaPredicted RBP18.94■□□□□ 0.62
SHANK2-220ENST00000608988 MRPL37Q9BZE1 423 aaKnown RBP18.94■□□□□ 0.62
SHANK2-220ENST00000608988 CRIM1Q9NZV1 1036 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 OR1A1Q9P1Q5 309 aa18.94■□□□□ 0.62
SHANK2-220ENST00000608988 ZNF705GA8MUZ8 300 aaPredicted RBP18.93■□□□□ 0.62
SHANK2-220ENST00000608988 HS3ST1O14792 307 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 SOX15O60248 233 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 IGKV1D-33P01593 117 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 IGKV1-33P01594 117 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 TMEM249Q2WGJ8 235 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 ACSM6Q6P461 480 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 NECAP1Q8NC96 275 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 OR10G9Q8NGN4 311 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 OR10G7Q8NGN6 311 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 PRDM6Q9NQX0 595 aa18.93■□□□□ 0.62
SHANK2-220ENST00000608988 A0A0G2JMM0 328 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 A0A1W2PPB8 328 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 A0A1W2PRS3 328 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 KIR3DP1A8MWS1 328 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 IL18BPO95998 194 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 SERPINA7P05543 415 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 FOLR3P41439 243 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 TRA2AQ13595 282 aaKnown RBP eCLIP18.92■□□□□ 0.62
SHANK2-220ENST00000608988 MRPL52Q86TS9 123 aaKnown RBP18.92■□□□□ 0.62
SHANK2-220ENST00000608988 OR4F5Q8NH21 305 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 ABHD3Q8WU67 409 aa18.92■□□□□ 0.62
SHANK2-220ENST00000608988 OR4F4Q96R69 305 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms