RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 CD3GP09693 182 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 CD1BP29016 333 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 SDC2P34741 201 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 ZNF137PP52743 207 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 EBI3Q14213 229 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 GNMTQ14749 295 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 OR2AK2Q8NG84 335 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 OR2T10Q8NGZ9 312 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 HDHD3Q9BSH5 251 aaPredicted RBP13.21□□□□□ -0.29
LINC00240-203ENST00000606878 ABHD14AQ9BUJ0 271 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 WNT10AQ9GZT5 417 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 ATG5Q9H1Y0 275 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 Q9N2K0 584 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 MOB4Q9Y3A3 225 aa13.21□□□□□ -0.29
LINC00240-203ENST00000606878 IGHV3-72A0A0B4J1Y9 119 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 RAB27BO00194 218 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 LANCL1O43813 399 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 AMY1AP04745 511 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 AMY2AP04746 511 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 FBLN7Q53RD9 439 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 C9orf152Q5JTZ5 239 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 CENPVQ7Z7K6 275 aaPredicted RBP13.2□□□□□ -0.3
LINC00240-203ENST00000606878 C11orf44Q8N8P7 122 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
LINC00240-203ENST00000606878 DAPK2Q9UIK4 370 aa13.2□□□□□ -0.3
LINC00240-203ENST00000606878 NCBP2LA6PVI3 153 aaKnown RBP13.19□□□□□ -0.3
LINC00240-203ENST00000606878 TRDCB7Z8K6 153 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 HSPA12AO43301 675 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 SCTP09683 121 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 ZBTB25P24278 435 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 CEACAM6P40199 344 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 MXD1Q05195 221 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 ARL6IP1Q15041 203 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 C2orf68Q2NKX9 166 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 MOGAT2Q3SYC2 334 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 TIMM50Q3ZCQ8 353 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 Q6ZPA2 131 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 IZUMO1Q8IYV9 350 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 GHITMQ9H3K2 345 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 KCNK7Q9Y2U2 307 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 PKD1L1Q8TDX9 2849 aa13.19□□□□□ -0.3
LINC00240-203ENST00000606878 A0A075B6Q4 140 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 SH2D7A6NKC9 451 aaPredicted RBP13.18□□□□□ -0.3
LINC00240-203ENST00000606878 SERPINE3A8MV23 424 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 FGF16O43320 207 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 FBXO24O75426 580 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 MOSP00540 346 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 GNB3P16520 340 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 TALDO1P37837 337 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 HLA-DRB3P79483 266 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 SFXN4Q6P4A7 337 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 OR5AU1Q8NGC0 362 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 CENPOQ9BU64 300 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 RNF167Q9H6Y7 350 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 PIPOXQ9P0Z9 390 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 SLC23A1Q9UHI7 598 aa13.18□□□□□ -0.3
LINC00240-203ENST00000606878 ZNF736B4DX44 427 aaPredicted RBP13.17□□□□□ -0.3
LINC00240-203ENST00000606878 ITGB1BP1O14713 200 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 CSF1P09603 554 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 CLEC2LP0C7M8 214 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
LINC00240-203ENST00000606878 ARFRP1Q13795 201 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 ODF3L1Q8IXM7 274 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 C5orf56Q8N8D9 126 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 OR8H1Q8NGG4 311 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 EDARADDQ8WWZ3 215 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 S1PR3Q99500 378 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 MMP27Q9H306 513 aa13.17□□□□□ -0.3
LINC00240-203ENST00000606878 MFNGO00587 321 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 RAB29O14966 203 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 RRP9O43818 475 aaKnown RBP13.16□□□□□ -0.3
LINC00240-203ENST00000606878 AIREO43918 545 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 SCGNO76038 276 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 CD28P10747 220 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 SNRPBP14678 240 aaKnown RBP13.16□□□□□ -0.3
LINC00240-203ENST00000606878 OR3A3P47888 321 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 SERPINB10P48595 397 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 CDNFQ49AH0 187 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 IDNKQ5T6J7 187 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 ZNF833PQ6ZTB9 187 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 Q8N6K4 173 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 OR4A4PQ8NGN8 299 aa13.16□□□□□ -0.3
LINC00240-203ENST00000606878 WIPF2Q8TF74 440 aaPredicted RBP13.16□□□□□ -0.3
LINC00240-203ENST00000606878 C11orf54Q9H0W9 315 aaPredicted RBP13.16□□□□□ -0.3
LINC00240-203ENST00000606878 TRRAPQ9Y4A5 3859 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 ST8SIA5O15466 376 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 FABP7O15540 132 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 TMEM127O75204 238 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 SCAND1P57086 179 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 FAM110DQ8TAY7 271 aaPredicted RBP13.15□□□□□ -0.3
LINC00240-203ENST00000606878 PHF21AQ96BD5 680 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 YIPF6Q96EC8 236 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 IFI27L2Q9H2X8 130 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 PLSCR3Q9NRY6 295 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 OR1A1Q9P1Q5 309 aa13.15□□□□□ -0.3
LINC00240-203ENST00000606878 SAA2-SAA4A0A096LPE2 208 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms