RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
RER1-209ENST00000605895 OR10G4Q8NGN3 311 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 FGFBP3Q8TAT2 258 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 VAMP8Q9BV40 100 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 RNF24Q9Y225 148 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 LOC102724200A0A096LPH7 203 aaPredicted RBP13.17□□□□□ -0.3
RER1-209ENST00000605895 TRAV1-1A0A0B4J248 108 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 WDR1O75083 606 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 NDUFB4O95168 129 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 TNFRSF4P43489 277 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 SLC35B1P78383 322 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 PRR31Q5SQ13 230 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 RAET1LQ5VY80 246 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 ZNF703Q9H7S9 590 aaPredicted RBP13.17□□□□□ -0.3
RER1-209ENST00000605895 GPR27Q9NS67 375 aa13.17□□□□□ -0.3
RER1-209ENST00000605895 SERF1AO75920 110 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 CELA2AP08217 269 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 ATP5G3P48201 142 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 PDLIM4P50479 330 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 GPM6AP51674 278 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 DAZAP2Q15038 168 aaPredicted RBP13.16□□□□□ -0.3
RER1-209ENST00000605895 CNN3Q15417 329 aaKnown RBP13.16□□□□□ -0.3
RER1-209ENST00000605895 KIAA1644Q3SXP7 199 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 SLC23A3Q6PIS1 610 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 Q6ZS52 159 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 BAGE3Q86Y29 109 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 BAGE2Q86Y30 109 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 OR10G9Q8NGN4 311 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 OR10G7Q8NGN6 311 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 OR1L6Q8NGR2 347 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 NABP1Q96AH0 204 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 CIB3Q96Q77 187 aaPredicted RBP13.16□□□□□ -0.3
RER1-209ENST00000605895 TMEM106BQ9NUM4 274 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 OR1A1Q9P1Q5 309 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 DMDP11532 3685 aa13.16□□□□□ -0.3
RER1-209ENST00000605895 SLC17A3O00476 420 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 SH2D1BO14796 132 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 ZNF32P17041 273 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 UCP1P25874 307 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 TFF3Q07654 80 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 SLC38A11Q08AI6 406 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 STPG4Q8N801 248 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 ADPRHL1Q8NDY3 354 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 CADM4Q8NFZ8 388 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 TAF15Q92804 592 aaKnown RBP eCLIP13.15□□□□□ -0.38e-7■■□□□ 11.8
RER1-209ENST00000605895 CCDC74BQ96LY2 380 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 MIEN1Q9BRT3 115 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 ASCL3Q9NQ33 180 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
RER1-209ENST00000605895 DOCK10Q96BY6 2186 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 TUSC2O75896 110 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 IGLV3-1P01715 115 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 F2RP25116 425 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 PTTG1IPP53801 180 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 FAM53AQ6NSI3 398 aaPredicted RBP13.15□□□□□ -0.3
RER1-209ENST00000605895 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 MCEMP1Q8IX19 187 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 SPSB1Q96BD6 273 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.3
RER1-209ENST00000605895 FSCN3Q9NQT6 498 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 RBMXL2O75526 392 aaKnown RBP13.15□□□□□ -0.3
RER1-209ENST00000605895 IGKV1-39P01597 117 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 IGKV1D-39P04432 117 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 FFAR4Q5NUL3 377 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 FBXO46Q6PJ61 603 aaPredicted RBP13.15□□□□□ -0.3
RER1-209ENST00000605895 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 MRGPRX4Q96LA9 322 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 P2RX4Q99571 388 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 WNT10AQ9GZT5 417 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 FGF21Q9NSA1 209 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 CLN8Q9UBY8 286 aa13.15□□□□□ -0.3
RER1-209ENST00000605895 TRAV38-1A0A0B4J264 116 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 CLEC18AA5D8T8 446 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 CEACAM8P31997 349 aaPredicted RBP13.14□□□□□ -0.31
RER1-209ENST00000605895 PPP1CBP62140 327 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 LRRC75BQ2VPJ9 315 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 CLEC18CQ8NCF0 446 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 TMEM9BQ9NQ34 198 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 CFHR1Q03591 330 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 CISD2Q8N5K1 135 aaKnown RBP13.14□□□□□ -0.31
RER1-209ENST00000605895 GPR35Q9HC97 309 aa13.14□□□□□ -0.31
RER1-209ENST00000605895 NPIPB13A6NJU9 1138 aa13.13□□□□□ -0.31
RER1-209ENST00000605895 NPIPB4C9JG80 1138 aa13.13□□□□□ -0.31
RER1-209ENST00000605895 TNFSF11O14788 317 aa13.13□□□□□ -0.31
RER1-209ENST00000605895 RBFOX2O43251 390 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■□□□□ 8.4
RER1-209ENST00000605895 KRASP01116 189 aa13.13□□□□□ -0.31
RER1-209ENST00000605895 NTF4P34130 210 aa13.13□□□□□ -0.31
RER1-209ENST00000605895 HINT1P49773 126 aaPredicted RBP13.13□□□□□ -0.31
RER1-209ENST00000605895 AKIRIN1Q9H9L7 192 aaPredicted RBP13.13□□□□□ -0.31
RER1-209ENST00000605895 AQP7P3A6NL99 342 aa13.13□□□□□ -0.31
RER1-209ENST00000605895 CCL25O15444 150 aa13.13□□□□□ -0.31
RER1-209ENST00000605895 IL6RP08887 468 aaPredicted RBP13.13□□□□□ -0.31
RER1-209ENST00000605895 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms