RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF891A8MT65 544 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 CEBPZOSA8MTT3 80 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 B5MCH6 92 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 NPIPA7E9PJI5 369 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 C17orf112F2Z3M2 114 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 H0YJW9 148 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 SDCBPO00560 298 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 MPPED1O15442 326 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TRAF3IP2O43734 574 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 DUSP11O75319 330 aaKnown RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 SCGB1D2O95969 90 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 CSTAP01040 98 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGKV1D-16P01601 117 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGLV3-1P01715 115 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 GYPAP02724 150 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 MT-ND6P03923 174 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 JMJD7P0C870 316 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGLC1P0CG04 106 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 NPIPA8P0DM63 369 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF823P16415 610 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 CRISP2P16562 243 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PTNP21246 168 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 MDKP21741 143 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 VDAC1P21796 283 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 CD1BP29016 333 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 BLVRBP30043 206 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 SRD5A2P31213 254 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PTGER1P34995 402 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 VIPR2P41587 438 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 GABRA2P47869 451 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF133P52736 654 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 FMODQ06828 376 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 EXOSC7Q15024 291 aaKnown RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR8B8Q15620 311 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TRIP6Q15654 476 aaKnown RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 VAMP3Q15836 100 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ADIRFQ15847 76 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF726P1Q15940 193 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ACKR1Q16570 336 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 C2orf27AQ580R0 203 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 NMSQ5H8A3 153 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 DCAF12Q5T6F0 453 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 RAET1LQ5VY80 246 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 KIAA0895LQ68EN5 471 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 MYO7BQ6PIF6 2116 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 KLHL24Q6TFL4 600 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 Q6ZN92 141 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 NEGR1Q7Z3B1 354 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 VN1R4Q7Z5H5 301 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ABHD12BQ7Z5M8 362 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 WDR5BQ86VZ2 330 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 SELENOHQ8IZQ5 122 aaKnown RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 SIGLECL1Q8N7X8 197 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PLPPR1Q8TBJ4 325 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 SCGB1C1Q8TD33 95 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 VN1R17PQ8TDU5 208 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PSMF1Q92530 271 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 DAZLQ92904 295 aaKnown RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM186Q96B77 213 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 STARD4Q96DR4 205 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ADAT3Q96EY9 351 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 REEP6Q96HR9 211 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 VSTM2LQ96N03 204 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 CCDC3Q9BQI4 270 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 HSPB9Q9BQS6 159 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TIMM29Q9BSF4 260 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 NICN1Q9BSH3 213 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 GNB1LQ9BYB4 327 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM222Q9H0R3 208 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PARLQ9H300 379 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF665Q9H7R5 613 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PLEK2Q9NYT0 353 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 KLHL13Q9P2N7 655 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 THAP10Q9P2Z0 257 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 RNF7Q9UBF6 113 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PLAGL1Q9UM63 463 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 PAM16Q9Y3D7 125 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 RBM7Q9Y580 266 aaKnown RBP3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 SPACA6W5XKT8 324 aa3.45□□□□□ -1.86
HMGB1P50-201ENST00000605814 ARID1AO14497 2285 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SHANK1Q9Y566 2161 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 KMT2EQ8IZD2 1858 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 C3orf85A0A1B0GTC6 90 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 CTXND1A0A1B0GTU2 59 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 A0A1B0GV72 72 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 NKX2-6A6NCS4 301 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 LRRC3CA6NJW4 275 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 KRTAP29-1A8MX34 341 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC33A1O00400 549 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 RBFOX2O43251 390 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 XRCC2O43543 280 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 CHST1O43916 411 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 PDE6DO43924 150 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 LMX1BO60663 402 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC16A7O60669 478 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SERF1AO75920 110 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 S1PR2O95136 353 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms