RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 MRPS18AQ9NVS2 196 aaKnown RBP12.94□□□□□ -0.34
CCDC12-210ENST00000604181 C19orf73Q9NVV2 129 aa12.94□□□□□ -0.34
CCDC12-210ENST00000604181 GAB2Q9UQC2 676 aa12.94□□□□□ -0.34
CCDC12-210ENST00000604181 PEX16Q9Y5Y5 336 aa12.94□□□□□ -0.34
CCDC12-210ENST00000604181 UBE2QL1A1L167 161 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 FCN1O00602 326 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 CRIP2P52943 208 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-210ENST00000604181 RIPK1Q13546 671 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 SMN1Q16637 294 aaKnown RBP12.93□□□□□ -0.34
CCDC12-210ENST00000604181 TMEM30BQ3MIR4 351 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 RPL22L1Q6P5R6 122 aaKnown RBP12.93□□□□□ -0.34
CCDC12-210ENST00000604181 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 CBR4Q8N4T8 237 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 FBXL15Q9H469 300 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 MBNL3Q9NUK0 354 aaKnown RBP12.93□□□□□ -0.34
CCDC12-210ENST00000604181 PAK1IP1Q9NWT1 392 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-210ENST00000604181 ORC6Q9Y5N6 252 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 A3GALT2U3KPV4 340 aa12.93□□□□□ -0.34
CCDC12-210ENST00000604181 FRAS1Q86XX4 4008 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 SAA2-SAA4A0A096LPE2 208 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 TRBV5-5A0A0J9YX44 114 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 LDLRAD4O15165 306 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 ZNF780AO75290 641 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-210ENST00000604181 SC5DO75845 299 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 SAA2P0DJI9 122 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-210ENST00000604181 RPS11P62280 158 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC12-210ENST00000604181 CX3CL1P78423 397 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 GLIPR1L1Q6UWM5 242 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 MRPL30Q8TCC3 161 aaKnown RBP12.92□□□□□ -0.34
CCDC12-210ENST00000604181 FAM103A1Q9BTL3 118 aaKnown RBP12.92□□□□□ -0.34
CCDC12-210ENST00000604181 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-210ENST00000604181 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
CCDC12-210ENST00000604181 NUBP2Q9Y5Y2 271 aa12.92□□□□□ -0.34
CCDC12-210ENST00000604181 OGG1O15527 345 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 OR8U9P0C7N5 309 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 PITPNAQ00169 270 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 FAM131AQ6UXB0 335 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 ISOC1Q96CN7 298 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 MS4A10Q96PG2 267 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 MYCBPQ99417 103 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-210ENST00000604181 SLC29A1Q99808 456 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 IFI27L2Q9H2X8 130 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 SPACA1Q9HBV2 294 aa12.91□□□□□ -0.34
CCDC12-210ENST00000604181 FGF20Q9NP95 211 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-210ENST00000604181 A0A1W2PPK0 400 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 WBP4O75554 376 aaKnown RBP12.9□□□□□ -0.34
CCDC12-210ENST00000604181 GPX5O75715 221 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 MAS1P04201 325 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 DOC2BQ14184 412 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 CCDC58Q4VC31 144 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 GLDNQ6ZMI3 551 aaPredicted RBP12.9□□□□□ -0.34
CCDC12-210ENST00000604181 LYPD6Q86Y78 171 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 ZFP41Q8N8Y5 198 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 Q96M66 194 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 RDH12Q96NR8 316 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 SELENOIQ9C0D9 397 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 PARP12Q9H0J9 701 aaKnown RBP12.9□□□□□ -0.34
CCDC12-210ENST00000604181 GHITMQ9H3K2 345 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 KIAA1456Q9P272 454 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 CLEC2DQ9UHP7 191 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 JPT1Q9UK76 154 aa12.9□□□□□ -0.34
CCDC12-210ENST00000604181 RRHO14718 337 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 YPEL1O60688 119 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 BAG2O95816 211 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 HSPB1P04792 205 aaKnown RBP12.89□□□□□ -0.35
CCDC12-210ENST00000604181 MGMTP16455 207 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 VEGFCP49767 419 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 RPL39P5Q59GN2 51 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 C6orf141Q5SZD1 244 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-210ENST00000604181 TRAT1Q6PIZ9 186 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 JAGN1Q8N5M9 183 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 GHSRQ92847 366 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 RHOVQ96L33 236 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 Q96MT0 163 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 YPEL2Q96QA6 119 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 OR4C12Q96R67 309 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 CST11Q9H112 138 aa12.89□□□□□ -0.35
CCDC12-210ENST00000604181 RPL36Q9Y3U8 105 aaKnown RBP12.89□□□□□ -0.35
CCDC12-210ENST00000604181 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 A8MZ25 164 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 ST8SIA5O15466 376 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 HSPA12AO43301 675 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 CT45A6P0DMU7 189 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 CT45A5P0DMU8 189 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 CT45A7P0DMV0 189 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 FUT3P21217 361 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 HTD2P86397 168 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 GPR176Q14439 515 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 DMKNQ6E0U4 476 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-210ENST00000604181 AWAT2Q6E213 333 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 CD200R1LQ6Q8B3 271 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 MRPS24Q96EL2 167 aaKnown RBP12.88□□□□□ -0.35
CCDC12-210ENST00000604181 PGLYRP3Q96LB9 341 aa12.88□□□□□ -0.35
CCDC12-210ENST00000604181 LOC100130705A0A1B0GUX0 176 aa12.87□□□□□ -0.35
CCDC12-210ENST00000604181 CA11O75493 328 aa12.87□□□□□ -0.35
CCDC12-210ENST00000604181 FSTP19883 344 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms