RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 RND3P61587 244 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ADAM8P78325 824 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 EIF2B1Q14232 305 aaKnown RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF266Q14584 549 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 C4orf26Q17RF5 130 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ENTPD8Q5MY95 495 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 FAM72AQ5TYM5 149 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 FAM72DQ6L9T8 149 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 TBC1D26Q86UD7 250 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 FAM72BQ86X60 149 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 MEX3DQ86XN8 651 aaKnown RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 C20orf196Q8IYI0 205 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 C1orf174Q8IYL3 243 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 LINC01561Q8N1V8 128 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 PNKDQ8N490 385 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 LINC01465Q8N7H1 131 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 OR2AJ1Q8NGZ0 328 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 CCDC140Q96MF4 163 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 TSSK2Q96PF2 358 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 RASL10BQ96S79 203 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 HSPB9Q9BQS6 159 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 OR52D1Q9H346 318 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 VSIG4Q9Y279 399 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 SPTBN5Q9NRC6 3674 aaKnown RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 REV3LO60673 3130 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 BRWD1Q9NSI6 2320 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 TRAV18A0A075B6X5 111 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 BORCS7-ASMTA0A0B4J1R7 106 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 IGHV2-26A0A0B4J1V2 119 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 MED19A0JLT2 244 aaPredicted RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 LOC730098B7Z3J9 87 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 IGLC1P0CG04 106 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 FCGR2CP31995 323 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 CDKN2AP42771 156 aaKnown RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 TAS2R50P59544 299 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 LILRA4P59901 499 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 PSG9Q00887 426 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 SSBP1Q04837 148 aaKnown RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 LTBQ06643 244 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF154Q13106 437 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 RNPS1Q15287 305 aaKnown RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF658BQ4V348 819 aaPredicted RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF585BQ52M93 769 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 STPG1Q5TH74 334 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 DEFB106AQ8N104 65 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 TCTEX1D1Q8N7M0 179 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM229BQ8NBD8 167 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 APCDD1LQ8NCL9 501 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 OR4N2Q8NGD1 307 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 AQP3Q92482 292 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 PSMF1Q92530 271 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 DNAJA3Q96EY1 480 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 LMLNQ96KR4 655 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 GFI1Q99684 422 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ATP5SQ99766 215 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 PARLQ9H300 379 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 FNDC4Q9H6D8 234 aaPredicted RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF703Q9H7S9 590 aaPredicted RBP4.04□□□□□ -1.76
LINC01109-201ENST00000603837 GOLGA2P5Q9HBQ8 144 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 A4GALTQ9NPC4 353 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 CHD9Q3L8U1 2897 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 SCN1AP35498 2009 aa4.04□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF106Q9H2Y7 1883 aaKnown RBP4.03□□□□□ -1.76
LINC01109-201ENST00000603837 PSMB11A5LHX3 300 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 F5H5K5 113 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 J3QRE1 110 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 HSPB1P04792 205 aaKnown RBP4.03□□□□□ -1.76
LINC01109-201ENST00000603837 CYBAP13498 195 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 TCN2P20062 427 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 FBLP22087 321 aaKnown RBP4.03□□□□□ -1.76
LINC01109-201ENST00000603837 IGFBP6P24592 240 aaPredicted RBP4.03□□□□□ -1.76
LINC01109-201ENST00000603837 RPL12P30050 165 aaKnown RBP4.03□□□□□ -1.76
LINC01109-201ENST00000603837 PGFP49763 221 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 STC1P52823 247 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 CLDN15P56746 228 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 ZXDAP98168 799 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 RUNX1Q01196 453 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 FUT5Q11128 374 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 HIST3H3Q16695 136 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 SLC25A52Q3SY17 297 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM42Q69YG0 159 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 NOXRED1Q6NXP6 359 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 DOLPP1Q86YN1 238 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 SLC38A5Q8WUX1 472 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 SCAMP4Q969E2 229 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 LINC00477Q96M19 166 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 MAP1LC3AQ9H492 121 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 FLRT3Q9NZU0 649 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 PTPRDP23468 1912 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 GREB1Q4ZG55 1949 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 ZC3H12DA2A288 527 aaKnown RBP4.03□□□□□ -1.76
LINC01109-201ENST00000603837 FOXI3A8MTJ6 420 aaPredicted RBP4.03□□□□□ -1.76
LINC01109-201ENST00000603837 DIRC3C9JPN6 131 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 NUPR1O60356 82 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 NGFRP08138 427 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 SMIM17P0DL12 118 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 PTGER1P34995 402 aa4.03□□□□□ -1.76
LINC01109-201ENST00000603837 PITX1P78337 314 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms