RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 PLSCR3Q9NRY6 295 aa13.89□□□□□ -0.19
IRF3-230ENST00000601809 IGHV3-72A0A0B4J1Y9 119 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 ZNF736B4DX44 427 aaPredicted RBP13.88□□□□□ -0.19
IRF3-230ENST00000601809 FGF16O43320 207 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 SLC2A2P11168 524 aaPredicted RBP13.88□□□□□ -0.19
IRF3-230ENST00000601809 TMEM11P17152 192 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 IL3RAP26951 378 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 RANBP1P43487 201 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 ZNF251Q9BRH9 671 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 PARP12Q9H0J9 701 aaKnown RBP13.88□□□□□ -0.19
IRF3-230ENST00000601809 IFI27L2Q9H2X8 130 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 DNAH3Q8TD57 4116 aa13.88□□□□□ -0.19
IRF3-230ENST00000601809 IGKV1-6A0A0C4DH72 117 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 TRIM64CA6NLI5 447 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 NOTOA8MTQ0 251 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 MFNGO00587 321 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 TXNL1O43396 289 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 LPLP06858 475 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 HLA-DRB3P79483 266 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 C2orf68Q2NKX9 166 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 TCTEX1D4Q5JR98 221 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 ZNF833PQ6ZTB9 187 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 MOB3BQ86TA1 216 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 TPRA1Q86W33 373 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 AGMATQ9BSE5 352 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 RNF167Q9H6Y7 350 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 C12orf4Q9NQ89 552 aa13.87□□□□□ -0.19
IRF3-230ENST00000601809 SMIM30A4D0T7 59 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 ITGB1BP1O14713 200 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 FBXO24O75426 580 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 GADD45AP24522 165 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 CD83Q01151 205 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 LSAMPQ13449 338 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 NEDD8Q15843 81 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 TGIF2LXQ8IUE1 241 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 Q8N9W7 124 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 OR10R2Q8NGX6 335 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 TOLLIPQ9H0E2 274 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 SSR3Q9UNL2 185 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 NOTCH1P46531 2555 aa13.86□□□□□ -0.19
IRF3-230ENST00000601809 SCTP09683 121 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 CLEC2LP0C7M8 214 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 HES1Q14469 280 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 HNF4GQ14541 408 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 C10orf99Q6UWK7 81 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 LYG1Q8N1E2 194 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 OR2T10Q8NGZ9 312 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 CITED2Q99967 270 aaPredicted RBP13.85□□□□□ -0.19
IRF3-230ENST00000601809 NABP2Q9BQ15 211 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 CMSS1Q9BQ75 279 aaKnown RBP13.85□□□□□ -0.19
IRF3-230ENST00000601809 CHMP1AQ9HD42 196 aaPredicted RBP13.85□□□□□ -0.19
IRF3-230ENST00000601809 ABRACLQ9P1F3 81 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 OR1A1Q9P1Q5 309 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 MGAT4AQ9UM21 535 aa13.85□□□□□ -0.19
IRF3-230ENST00000601809 SAA2-SAA4A0A096LPE2 208 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 PROP1O75360 226 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 RGS11O94810 467 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 MOSP00540 346 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 IGHG2P01859 326 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 CSF1P09603 554 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 SAA2P0DJI9 122 aaPredicted RBP13.84□□□□□ -0.19
IRF3-230ENST00000601809 HIST1H1DP16402 221 aaKnown RBP13.84□□□□□ -0.19
IRF3-230ENST00000601809 CD36P16671 472 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 SDC2P34741 201 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 OR3A3P47888 321 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 SFXN4Q6P4A7 337 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 NDUFA11Q86Y39 141 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 FAM71E2Q8N5Q1 922 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 IL1F10Q8WWZ1 152 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 RAB3CQ96E17 227 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 CHCHD6Q9BRQ6 235 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 CENPOQ9BU64 300 aa13.84□□□□□ -0.19
IRF3-230ENST00000601809 MRPL20Q9BYC9 149 aaKnown RBP13.84□□□□□ -0.19
IRF3-230ENST00000601809 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.84□□□□□ -0.19
IRF3-230ENST00000601809 PRKDCP78527 4128 aaKnown RBP13.83□□□□□ -0.2
IRF3-230ENST00000601809 FCGR3AP08637 254 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 GNB3P16520 340 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 FAM71F2Q6NXP2 309 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 OR2AK2Q8NG84 335 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 OR5AU1Q8NGC0 362 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 SETD6Q8TBK2 473 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 YIPF6Q96EC8 236 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 KCTD7Q96MP8 289 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 CABLES2Q9BTV7 478 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 SLC23A1Q9UHI7 598 aa13.83□□□□□ -0.2
IRF3-230ENST00000601809 ELF5Q9UKW6 265 aaPredicted RBP13.83□□□□□ -0.2
IRF3-230ENST00000601809 LINC01548A6NM66 108 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 TRDCB7Z8K6 153 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 ST8SIA5O15466 376 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 F2RL1P55085 397 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 TSPAN14Q8NG11 270 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 FAM110DQ8TAY7 271 aaPredicted RBP13.82□□□□□ -0.2
IRF3-230ENST00000601809 RITA1Q96K30 269 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 S1PR3Q99500 378 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 C11orf54Q9H0W9 315 aaPredicted RBP13.82□□□□□ -0.2
IRF3-230ENST00000601809 ABCG5Q9H222 651 aa13.82□□□□□ -0.2
IRF3-230ENST00000601809 LIN7CQ9NUP9 197 aaKnown RBP13.82□□□□□ -0.2
IRF3-230ENST00000601809 A0A087WXM4 84 aa13.81□□□□□ -0.2
IRF3-230ENST00000601809 SERPINE3A8MV23 424 aa13.81□□□□□ -0.2
IRF3-230ENST00000601809 TNFAIP8O95379 198 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms