RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 GATA4P43694 442 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 FXYD4P59646 89 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 ERVK11-1P61568 191 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 WDR82Q6UXN9 313 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 LYZL2Q7Z4W2 148 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 BATF2Q8N1L9 274 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 MUC15Q8N387 334 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 ERGIC1Q969X5 290 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 ZNF488Q96MN9 340 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 SMDT1Q9H4I9 107 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 DYNLRB1Q9NP97 96 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 LSM5Q9Y4Y9 91 aaKnown RBP9.82□□□□□ -0.84
VRK3-223ENST00000601341 FLNCQ14315 2725 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 TRDCB7Z8K6 153 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 NPIPB11E5RHQ5 1161 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 PHF1O43189 567 aaPredicted RBP9.81□□□□□ -0.84
VRK3-223ENST00000601341 NXPH2O95156 264 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 CD55P08174 381 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 SLC25A6P12236 298 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 PVALBP20472 110 aaPredicted RBP9.81□□□□□ -0.84
VRK3-223ENST00000601341 S100GP29377 79 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 GNRHRP30968 328 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 CFHR2P36980 270 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 LPAR6P43657 344 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 SWI5Q1ZZU3 235 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 PHLDA2Q53GA4 152 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 ZNF880Q6PDB4 577 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 MEX3BQ6ZN04 569 aaKnown RBP9.81□□□□□ -0.84
VRK3-223ENST00000601341 Q6ZPA2 131 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 ZNF826PQ6ZT77 177 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 OR10Z1Q8NGY1 313 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 ITLN1Q8WWA0 313 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 C11orf1Q9H5F2 150 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 TREM1Q9NP99 234 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 ICE1Q9Y2F5 2266 aa9.81□□□□□ -0.84
VRK3-223ENST00000601341 RNASEK-C17orf49H0YIS7 233 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 GOSR1O95249 250 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 RNF224P0DH78 156 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 TNFRSF1AP19438 455 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 UCP1P25874 307 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 ZNF266Q14584 549 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 TESK1Q15569 626 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 SP6Q3SY56 376 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 FIP1L1Q6UN15 594 aaKnown RBP9.8□□□□□ -0.84
VRK3-223ENST00000601341 FOXRED2Q8IWF2 684 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 CMTM1Q8IZ96 169 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 SLC35G3Q8N808 338 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 ZNF565Q8N9K5 539 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 LFNGQ8NES3 379 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 EGLN1Q9GZT9 426 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 HRH4Q9H3N8 390 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 RALYQ9UKM9 306 aaKnown RBP9.8□□□□□ -0.84
VRK3-223ENST00000601341 USP9XQ93008 2570 aaPredicted RBP9.8□□□□□ -0.84
VRK3-223ENST00000601341 A0A1B0GW64 132 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 A6NNC1 897 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 H7C2Y5 167 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 MUC1P15941 1255 aaPredicted RBP9.8□□□□□ -0.84
VRK3-223ENST00000601341 VDAC1P21796 283 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 MDH2P40926 338 aaKnown RBP9.8□□□□□ -0.84
VRK3-223ENST00000601341 GUCA2BQ16661 112 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 FAM74A3Q4VXF1 159 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 SHEQ5VZ18 495 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 MOB1BQ7L9L4 216 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 MOGAT3Q86VF5 341 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 DMBX1Q8NFW5 382 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 DYRK2Q92630 601 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 TP53RKQ96S44 253 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 SPOCK3Q9BQ16 436 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 SLC25A31Q9H0C2 315 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 HES4Q9HCC6 221 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 GCM1Q9NP62 436 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 KPTNQ9Y664 436 aa9.8□□□□□ -0.84
VRK3-223ENST00000601341 UBR5O95071 2799 aaPredicted RBP9.79□□□□□ -0.84
VRK3-223ENST00000601341 FAM221AA4D161 298 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 UMAD1C9J7I0 102 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 H0Y980 276 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 HS3ST1O14792 307 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 SCGB1D2O95969 90 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 RCC1P18754 421 aaPredicted RBP9.79□□□□□ -0.84
VRK3-223ENST00000601341 LMO1P25800 156 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 CCL8P80075 99 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 BAXQ07812 192 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
VRK3-223ENST00000601341 SMIM21Q3B7S5 101 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 SPRNQ5BIV9 151 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 IGSF11Q5DX21 431 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 SPIN3Q5JUX0 258 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 ZNF695Q8IW36 515 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 ZCCHC24Q8N2G6 241 aaKnown RBP9.79□□□□□ -0.84
VRK3-223ENST00000601341 OR5D13Q8NGL4 314 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 Q8TCH9 128 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 LRRC29Q8WV35 223 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 CABLES2Q9BTV7 478 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 IL36RNQ9UBH0 155 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 PPP1R3CQ9UQK1 317 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 RCL1Q9Y2P8 373 aaKnown RBP9.79□□□□□ -0.84
VRK3-223ENST00000601341 ABCA4P78363 2273 aa9.79□□□□□ -0.84
VRK3-223ENST00000601341 SPTAN1Q13813 2472 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms