RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ATP1A1-AS1Q5TC04 95 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 LCN15Q6UWW0 184 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 MOB1BQ7L9L4 216 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 SSX7Q7RTT5 188 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF525Q8N782 197 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 SCGB1C1Q8TD33 95 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 WDYHV1Q96HA8 205 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF665Q9H7R5 613 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 NIT2Q9NQR4 276 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 TREM2Q9NZC2 230 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 NXPH2O95156 264 aa17.08■□□□□ 0.33
SHKBP1-225ENST00000600733 CEBPDP49716 269 aaPredicted RBP17.08■□□□□ 0.33
SHKBP1-225ENST00000600733 FGF8P55075 233 aaPredicted RBP17.08■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF726P1Q15940 193 aa17.08■□□□□ 0.33
SHKBP1-225ENST00000600733 OR14J1Q9UGF5 321 aa17.08■□□□□ 0.33
SHKBP1-225ENST00000600733 A0A087WWC5 75 aa17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 TRAV1-1A0A0B4J248 108 aa17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 PIGBOS1A0A0B4J2F0 54 aa17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 SMPD2O60906 423 aa17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 IDH3GP51553 393 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 PPP1CBP62140 327 aa17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 DRAM1Q8N682 238 aa17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 ZNF251Q9BRH9 671 aa17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 LIN7CQ9NUP9 197 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-225ENST00000600733 RAB11AP62491 216 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 HOXA4Q00056 320 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 SPANXN5Q5MJ07 72 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 GRPP07492 148 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 KIAA0141Q14154 515 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 ZNF787Q6DD87 383 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 FAM180AQ6UWF9 173 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 LILRB2Q8N423 598 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 TMEM9BQ9NQ34 198 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 POLDIP2Q9Y2S7 368 aa17.07■□□□□ 0.32
SHKBP1-225ENST00000600733 DSPP15924 2871 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 CACNA1DQ01668 2161 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 TGIF2-C20orf24A0A0A6YYL0 155 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 PGA5P0DJD9 388 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 CD59P13987 128 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 FAM53AQ6NSI3 398 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 SLC35E3Q7Z769 313 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 Q8IYB0 196 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 TCTEX1D2Q8WW35 142 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 GSN-AS1Q9NRJ2 163 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 MBNL3Q9NUK0 354 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 USF3Q68DE3 2245 aa17.06■□□□□ 0.32
SHKBP1-225ENST00000600733 TRGV5A0A0B4J1U4 118 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 LINC00587B1AMM8 73 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 FABP1P07148 127 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 EIF2S3P41091 472 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 FAM90A2PQ658T7 463 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 RCC1LQ96I51 464 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 TCEAL7Q9BRU2 100 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 RNF150Q9ULK6 438 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 PPIHO43447 177 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 YIF1AO95070 293 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 BCL2P10415 239 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 CD46P15529 392 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 CD200P41217 278 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 ZNF146Q15072 292 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 ZNF674Q2M3X9 581 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 DHRS13Q6UX07 377 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 FGFRL1Q8N441 504 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 SLC25A40Q8TBP6 338 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 NBEAQ8NFP9 2946 aa17.05■□□□□ 0.32
SHKBP1-225ENST00000600733 ASPMQ8IZT6 3477 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 SH2D1BO14796 132 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 PSPNO60542 156 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 RAMP3O60896 148 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 LYZL6O75951 148 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 TNFSF15O95150 251 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 PLA2G5P39877 138 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 GLIPR1P48060 266 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 HBG1P69891 147 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 HBG2P69892 147 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 HNF4GQ14541 408 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 LRRC75BQ2VPJ9 315 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 OR2B11Q5JQS5 317 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 TMPRSS7Q7RTY8 843 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 GCNT2Q8N0V5 402 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 OR4C12Q96R67 309 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 CDH20Q9HBT6 801 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 WIPI2Q9Y4P8 454 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 PRR14LQ5THK1 2151 aa17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 SPENQ96T58 3664 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 ELLP55199 621 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 CXorf67Q86X51 503 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 PSMG3Q9BT73 122 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-225ENST00000600733 PMP22Q01453 160 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 PSG7Q13046 419 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 OR10G4Q8NGN3 311 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 OR1L1Q8NH94 360 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 FER1L6-AS2Q96M78 137 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 CISD1Q9NZ45 108 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 UBE2L5PA0A1B0GUS4 154 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 IGHV1-2P23083 117 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 UBE2NP61088 152 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 MRPL49Q13405 166 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 OR8G2PQ6IF36 304 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 WDR61Q9GZS3 305 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms