RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 CCL13Q99616 98 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 RBM7Q9Y580 266 aaKnown RBP16.67■□□□□ 0.26
PNKP-214ENST00000600573 TMEM56-RWDD3S4R434 201 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 C15orf65H3BRN8 121 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 TNFRSF13BO14836 293 aaPredicted RBP16.67■□□□□ 0.26
PNKP-214ENST00000600573 UCP1P25874 307 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 RAB14P61106 215 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 MEF2CQ06413 473 aaPredicted RBP16.67■□□□□ 0.26
PNKP-214ENST00000600573 LYZL2Q7Z4W2 148 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 OR1L1Q8NH94 360 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 LHFPL5Q8TAF8 219 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 LPAR3Q9UBY5 353 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 JPT1Q9UK76 154 aa16.67■□□□□ 0.26
PNKP-214ENST00000600573 SMG1Q96Q15 3661 aaKnown RBP16.66■□□□□ 0.26
PNKP-214ENST00000600573 TRGV10A0A0A0MS01 117 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 PGLYRP1O75594 196 aaPredicted RBP16.66■□□□□ 0.26
PNKP-214ENST00000600573 EDDM3BP56851 147 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 CLLU1Q5K131 121 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 C11orf71Q6IPW1 123 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 ZNF695Q8IW36 515 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 SLC35G3Q8N808 338 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 UBALD1Q8TB05 177 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 EDARADDQ8WWZ3 215 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 IL22RA2Q969J5 263 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 SPIN2AQ99865 258 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 SPIN2BQ9BPZ2 258 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 OR2S2Q9NQN1 319 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 ZFP57Q9NU63 452 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 OR5AC2Q9NZP5 309 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 KCNS2Q9ULS6 477 aa16.66■□□□□ 0.26
PNKP-214ENST00000600573 RAI1Q7Z5J4 1906 aaPredicted RBP16.66■□□□□ 0.26
PNKP-214ENST00000600573 CHD6Q8TD26 2715 aa16.65■□□□□ 0.26
PNKP-214ENST00000600573 F2RL2O00254 374 aa16.65■□□□□ 0.26
PNKP-214ENST00000600573 RLN2P04090 185 aa16.65■□□□□ 0.26
PNKP-214ENST00000600573 OR1S1Q8NH92 325 aa16.65■□□□□ 0.26
PNKP-214ENST00000600573 SCARB1Q8WTV0 552 aa16.65■□□□□ 0.26
PNKP-214ENST00000600573 AQP10Q96PS8 301 aa16.65■□□□□ 0.26
PNKP-214ENST00000600573 ARPC5LQ9BPX5 153 aa16.65■□□□□ 0.26
PNKP-214ENST00000600573 KLF2Q9Y5W3 355 aaPredicted RBP16.65■□□□□ 0.26
PNKP-214ENST00000600573 DYSFO75923 2080 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 hADV38S2A0JD32 116 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 ITGB1BP1O14713 200 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 TMPRSS2O15393 492 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 DANCRP0C864 163 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 CGB3P0DN86 165 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 CGB7P0DN87 165 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 F2RP25116 425 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 KIAA2026Q5HYC2 2103 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 TGIF2LYQ8IUE0 185 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 SELENOHQ8IZQ5 122 aaKnown RBP16.64■□□□□ 0.25
PNKP-214ENST00000600573 ZNF843Q8N446 348 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 TPRX1Q8N7U7 411 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 LINC00574Q9H8X3 128 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 TAS2R3Q9NYW6 316 aa16.64■□□□□ 0.25
PNKP-214ENST00000600573 ANKHD1Q8IWZ3 2542 aaKnown RBP16.64■□□□□ 0.25
PNKP-214ENST00000600573 DIDO1Q9BTC0 2240 aaKnown RBP16.64■□□□□ 0.25
PNKP-214ENST00000600573 RPS10-NUDT3A0A1W2PQS6 291 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 ZNF729A6NN14 1252 aaPredicted RBP16.63■□□□□ 0.25
PNKP-214ENST00000600573 RNF212BA8MTL3 300 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 NDUFB3O43676 98 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 YPEL1O60688 119 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 DEDDO75618 318 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 CDS2O95674 445 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 LRRC10Q5BKY1 277 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 OR10A7Q8NGE5 316 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 ST8SIA2Q92186 375 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 RBPMSQ93062 196 aaKnown RBP16.63■□□□□ 0.25
PNKP-214ENST00000600573 YPEL2Q96QA6 119 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 DCAF16Q9NXF7 216 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 SLC25A10Q9UBX3 287 aaPredicted RBP16.63■□□□□ 0.25
PNKP-214ENST00000600573 KBTBD11-OT1A0A1B0GTJ5 212 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 LINC00862A6NCI5 91 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 A6NNC1 897 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 TNFSF12O43508 249 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 SPDEFO95238 335 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 SCGB1D2O95969 90 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 PRB1P04280 392 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 SSTR5P35346 364 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 ZNF645Q8N7E2 425 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 FAM216BQ8N7L0 139 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 OR52L2PQ8NGH6 319 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 RRNAD1Q96FB5 475 aaKnown RBP16.63■□□□□ 0.25
PNKP-214ENST00000600573 ZNF471Q9BX82 626 aaPredicted RBP16.63■□□□□ 0.25
PNKP-214ENST00000600573 GSX2Q9BZM3 304 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 LIN7CQ9NUP9 197 aaKnown RBP16.63■□□□□ 0.25
PNKP-214ENST00000600573 CALYQ9NYX4 217 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 CLN8Q9UBY8 286 aa16.63■□□□□ 0.25
PNKP-214ENST00000600573 LSM5Q9Y4Y9 91 aaKnown RBP16.63■□□□□ 0.25
PNKP-214ENST00000600573 TANC2Q9HCD6 1990 aa16.62■□□□□ 0.25
PNKP-214ENST00000600573 OR8U9P0C7N5 309 aa16.62■□□□□ 0.25
PNKP-214ENST00000600573 FOXRED2Q8IWF2 684 aa16.62■□□□□ 0.25
PNKP-214ENST00000600573 OR52M1Q8NGK5 317 aa16.62■□□□□ 0.25
PNKP-214ENST00000600573 OR8U1Q8NH10 309 aa16.62■□□□□ 0.25
PNKP-214ENST00000600573 PARP12Q9H0J9 701 aaKnown RBP16.62■□□□□ 0.25
PNKP-214ENST00000600573 LINC00312Q9Y6C7 94 aa16.62■□□□□ 0.25
PNKP-214ENST00000600573 NBASA2RRP1 2371 aa16.62■□□□□ 0.25
PNKP-214ENST00000600573 F5H0A9 414 aaPredicted RBP16.61■□□□□ 0.25
PNKP-214ENST00000600573 C19orf84I3L1E1 186 aa16.61■□□□□ 0.25
PNKP-214ENST00000600573 GPR37O15354 613 aa16.61■□□□□ 0.25
PNKP-214ENST00000600573 ADAM20O43506 726 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms