RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 FOXB2Q5VYV0 432 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 LAX1Q8IWV1 398 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 OR10X1Q8NGY0 326 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 MCFD2Q8NI22 146 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 DPAGT1Q9H3H5 408 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 OR1A1Q9P1Q5 309 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 EXTL2Q9UBQ6 330 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 POMT1Q9Y6A1 747 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 IGHV4-59P01825 116 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 PRSS3P35030 304 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 CBX5P45973 191 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 UBA52P62987 128 aaKnown RBP15.62■□□□□ 0.09
UPF1-209ENST00000600310 LRRC75BQ2VPJ9 315 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 IGSF11Q5DX21 431 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 HOGA1Q86XE5 327 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 DUX5Q96PT3 197 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 SSX3Q99909 188 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 ABHD14AQ9BUJ0 271 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 C6orf62Q9GZU0 229 aaPredicted RBP15.62■□□□□ 0.09
UPF1-209ENST00000600310 TOLLIPQ9H0E2 274 aa15.62■□□□□ 0.09
UPF1-209ENST00000600310 TRBV6-7A0A0A0MS04 114 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 TRIM77I1YAP6 450 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 ITGB1BP1O14713 200 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 HSPA12AO43301 675 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 CEACAM6P40199 344 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 DYNLT3P51808 116 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 ZNF137PP52743 207 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 SRSF2Q01130 221 aaKnown RBP15.61■□□□□ 0.09
UPF1-209ENST00000600310 CNIH2Q6PI25 160 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 OR5R1Q8NH85 324 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 ST6GALNAC6Q969X2 333 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 RPEQ96AT9 228 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 A3GALT2U3KPV4 340 aa15.61■□□□□ 0.09
UPF1-209ENST00000600310 CTXN2P0C2S0 81 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 IL3RAP26951 378 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 CCDC144NLQ6NUI1 221 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 SNX29P2Q8IUI4 249 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 GVQW1Q8N7I0 195 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 BEST4Q8NFU0 473 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 OR2AK2Q8NG84 335 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 GPX8Q8TED1 209 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 ZFAND2BQ8WV99 257 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 GCDHQ92947 438 aaPredicted RBP15.6■□□□□ 0.09
UPF1-209ENST00000600310 TOMM40LQ969M1 308 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 PARP12Q9H0J9 701 aaKnown RBP15.6■□□□□ 0.09
UPF1-209ENST00000600310 MMP27Q9H306 513 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 SCPEP1Q9HB40 452 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 ANXA10Q9UJ72 324 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 ANAPC10Q9UM13 185 aa15.6■□□□□ 0.09
UPF1-209ENST00000600310 BTBD17A6NE02 478 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 A6NHS1 94 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 SULT1C2O00338 296 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 BET1O15155 118 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 LPLP06858 475 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 RNASE1P07998 156 aaKnown RBP15.59■□□□□ 0.09
UPF1-209ENST00000600310 RAB7AP51149 207 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 ZNF816Q0VGE8 651 aaPredicted RBP15.59■□□□□ 0.09
UPF1-209ENST00000600310 DIAPH2-AS1Q14236 149 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 PLA1AQ53H76 456 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 LYG1Q8N1E2 194 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 OR10J5Q8NHC4 309 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 PIFOQ8TCI5 191 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 C15orf40Q8WUR7 153 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 EDARADDQ8WWZ3 215 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 DIRAS2Q96HU8 199 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 MDFIQ99750 246 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 CHIAQ9BZP6 476 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 C11orf54Q9H0W9 315 aaPredicted RBP15.59■□□□□ 0.09
UPF1-209ENST00000600310 TNFRSF19Q9NS68 423 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 RDH8Q9NYR8 311 aa15.59■□□□□ 0.09
UPF1-209ENST00000600310 MEIS3P1A6NDR6 274 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 H3BUX3 64 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 ARHGDIBP52566 201 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 C16orf87Q6PH81 154 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 ODF3L1Q8IXM7 274 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 OR8H3Q8N146 312 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 ABHD1Q96SE0 405 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 IFI27L2Q9H2X8 130 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 IFT46Q9NQC8 304 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 ABCB10Q9NRK6 738 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 VPREB3Q9UKI3 123 aa15.58■□□□□ 0.08
UPF1-209ENST00000600310 A0A1W2PPI3 338 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 HSD17B6O14756 317 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 ST8SIA5O15466 376 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 LANCL1O43813 399 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 GAPDHP04406 335 aaKnown RBP15.57■□□□□ 0.08
UPF1-209ENST00000600310 NAT1P18440 290 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 BRS3P32247 399 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 TNFSF8P32971 234 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 RAB13P51153 203 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 H1FOOQ8IZA3 346 aaPredicted RBP15.57■□□□□ 0.08
UPF1-209ENST00000600310 FAM216AQ8WUB2 273 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 SNAPC3Q92966 411 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 GINS4Q9BRT9 223 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 AGMATQ9BSE5 352 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 GHITMQ9H3K2 345 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 PIPOXQ9P0Z9 390 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 RABL2AQ9UBK7 228 aaPredicted RBP15.57■□□□□ 0.08
UPF1-209ENST00000600310 RABL2BQ9UNT1 228 aa15.57■□□□□ 0.08
UPF1-209ENST00000600310 MXRA5Q9NR99 2828 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms