RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 IGF1P05019 195 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 PSMA1P25786 263 aaKnown RBP12.42□□□□□ -0.42
VRK3-221ENST00000600284 PPP1CCP36873 323 aaKnown RBP12.42□□□□□ -0.42
VRK3-221ENST00000600284 RANBP1P43487 201 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 QRFPP83859 136 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 HMGN3Q15651 99 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 CXorf66Q5JRM2 361 aaPredicted RBP12.42□□□□□ -0.42
VRK3-221ENST00000600284 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 C8orf86Q6ZUL3 223 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 C6orf201Q7Z4U5 140 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 ODF3L1Q8IXM7 274 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 KLHL30-AS1Q8NEE0 82 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 DPF1Q92782 380 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
VRK3-221ENST00000600284 NAPSAO96009 420 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 OR5H8P0DN80 308 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 MYF6P23409 242 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 CDX1P47902 265 aaPredicted RBP12.41□□□□□ -0.42
VRK3-221ENST00000600284 AQP4P55087 323 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 CFHR3Q02985 330 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 UNC119Q13432 240 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 GNMTQ14749 295 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 LIPKQ5VXJ0 399 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 FAM71F2Q6NXP2 309 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 ZNF880Q6PDB4 577 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 ZNF833PQ6ZTB9 187 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 C18orf65Q6ZTR6 163 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 MOB1BQ7L9L4 216 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 OR2AK2Q8NG84 335 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 GHITMQ9H3K2 345 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 PLEKHJ1Q9NW61 149 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 STEAP1Q9UHE8 339 aa12.41□□□□□ -0.42
VRK3-221ENST00000600284 TRBV6-6A0A0A6YYG2 114 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 RGS10O43665 173 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 ARL6IP5O75915 188 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 IGHG4P01861 327 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 RPLP1P05386 114 aaKnown RBP12.4□□□□□ -0.42
VRK3-221ENST00000600284 VDAC1P21796 283 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 BLVRBP30043 206 aaPredicted RBP12.4□□□□□ -0.42
VRK3-221ENST00000600284 KRTAP10-11P60412 298 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 KIR2DS1Q14954 304 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 MMDQ15546 238 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 TMEM91Q6ZNR0 172 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 SVOPQ8N4V2 548 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 FAM89BQ8N5H3 189 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 NRG4Q8WWG1 115 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 CYYR1Q96J86 154 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 NABP2Q9BQ15 211 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 HSPB9Q9BQS6 159 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 NICN1Q9BSH3 213 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 URM1Q9BTM9 101 aaKnown RBP12.4□□□□□ -0.42
VRK3-221ENST00000600284 ANKRD60Q9BZ19 345 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 PIPOXQ9P0Z9 390 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
VRK3-221ENST00000600284 MGAT4AQ9UM21 535 aa12.4□□□□□ -0.42
VRK3-221ENST00000600284 K7EIL1 84 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 CCL24O00175 119 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 SLC17A2O00624 439 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 ARSBP15848 533 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 ACTBP60709 375 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
VRK3-221ENST00000600284 PRSS48Q7RTY5 328 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 C5orf24Q7Z6I8 188 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 NPBQ8NG41 125 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 RAX2Q96IS3 184 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 ZNF251Q9BRH9 671 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
VRK3-221ENST00000600284 LPAR5Q9H1C0 372 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 VCX3BQ9H321 246 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
VRK3-221ENST00000600284 HSF4Q9ULV5 492 aa12.39□□□□□ -0.43
VRK3-221ENST00000600284 SAA2-SAA4A0A096LPE2 208 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 RAB29O14966 203 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 HSMCR30P0CW71 290 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 SAA2P0DJI9 122 aaPredicted RBP12.38□□□□□ -0.43
VRK3-221ENST00000600284 CPEP16870 476 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 CRHBPP24387 322 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 PSMB8P28062 276 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 PSMD7P51665 324 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 KCTD7Q96MP8 289 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 IFI27L2Q9H2X8 130 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 PLGRKTQ9HBL7 147 aa12.38□□□□□ -0.43
VRK3-221ENST00000600284 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 NBR2O15453 112 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 PPIFP30405 207 aaKnown RBP12.37□□□□□ -0.43
VRK3-221ENST00000600284 HOXD3P31249 432 aaPredicted RBP12.37□□□□□ -0.43
VRK3-221ENST00000600284 OR3A3P47888 321 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 RPS25P62851 125 aaKnown RBP12.37□□□□□ -0.43
VRK3-221ENST00000600284 DCTN2Q13561 401 aaKnown RBP12.37□□□□□ -0.43
VRK3-221ENST00000600284 GFI1Q99684 422 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 OR51J1Q9H342 316 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 KCNK15Q9H427 330 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 ACOT13Q9NPJ3 140 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 SLC23A1Q9UHI7 598 aa12.37□□□□□ -0.43
VRK3-221ENST00000600284 AK6Q9Y3D8 172 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms