RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
SYMPK-213ENST00000599460 CLLU1Q5K131 121 aa12.64□□□□□ -0.39
SYMPK-213ENST00000599460 NECAP1Q8NC96 275 aa12.64□□□□□ -0.39
SYMPK-213ENST00000599460 ATP5SQ99766 215 aa12.64□□□□□ -0.39
SYMPK-213ENST00000599460 APELAP0DMC3 54 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 MMDQ15546 238 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 TBR1Q16650 682 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 BARX1Q9HBU1 254 aaPredicted RBP12.63□□□□□ -0.39
SYMPK-213ENST00000599460 MYLKQ15746 1914 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 SRSF6Q13247 344 aaKnown RBP12.63□□□□□ -0.39
SYMPK-213ENST00000599460 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 SDK2Q58EX2 2172 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 PPP1R2P9O14990 202 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 C1QL2Q7Z5L3 287 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 TEX29Q8N6K0 151 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 ZNF645Q8N7E2 425 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 BVESQ8NE79 360 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 TXN2Q99757 166 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 CALYQ9NYX4 217 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 RNF24Q9Y225 148 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 HPRT1P00492 218 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 NDUFA6P56556 154 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 HILPDAQ9Y5L2 63 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 TOX4O94842 621 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 GFRA1P56159 465 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 OR10G4Q8NGN3 311 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 OR10G9Q8NGN4 311 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 OR10G7Q8NGN6 311 aa12.63□□□□□ -0.39
SYMPK-213ENST00000599460 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
SYMPK-213ENST00000599460 LY6G6EA0A0G2JKS1 128 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 MAP1LC3B2A6NCE7 125 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 CNN1P51911 297 aaKnown RBP12.62□□□□□ -0.39
SYMPK-213ENST00000599460 LY6DQ14210 128 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 PRR27Q6MZM9 219 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 ZNF561Q8N587 486 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 MAP1LC3BQ9GZQ8 125 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 U3KQA8 63 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 RNASEK-C17orf49H0YIS7 233 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 WNT9BO14905 357 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 ORM2P19652 201 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 GUK1Q16774 197 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 KLHDC3Q9BQ90 382 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 SLC25A22Q9H936 323 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 PARD6AQ9NPB6 346 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 GPR132Q9UNW8 380 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 GLIPR1P48060 266 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 ZNF90Q03938 601 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 GGNQ86UU5 652 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 OR4F17Q8NGA8 305 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 MEGF10Q96KG7 1140 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 IDI2-AS1Q9NZ38 188 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 DUXBA0A1W2PPF3 345 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 RGS13O14921 159 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 LYZP61626 148 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 RNF212Q495C1 297 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 PIMREGQ9BSJ6 248 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 SH2D2AQ9NP31 389 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 SLC45A2Q9UMX9 530 aa12.62□□□□□ -0.39
SYMPK-213ENST00000599460 TGOLN2O43493 480 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 SCGB1D1O95968 90 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 CDC34P49427 236 aaPredicted RBP12.61□□□□□ -0.39
SYMPK-213ENST00000599460 RHOBP62745 196 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 AAMDCQ9H7C9 122 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 OR51B2Q9Y5P1 312 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 RPS11P62280 158 aaKnown RBP eCLIP12.61□□□□□ -0.39
SYMPK-213ENST00000599460 EWSR1Q01844 656 aaKnown RBP eCLIP12.61□□□□□ -0.39
SYMPK-213ENST00000599460 NCR3LG1Q68D85 454 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 MMP26Q9NRE1 261 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 ALPK2Q86TB3 2170 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 ATP5J2P56134 94 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 PJVKQ0ZLH3 352 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 ASPHD2Q6ICH7 369 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 BPIFCQ8NFQ6 507 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 PHYHIPLQ96FC7 376 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 REPIN1Q9BWE0 567 aaKnown RBP12.61□□□□□ -0.39
SYMPK-213ENST00000599460 MIOXQ9UGB7 285 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 IGHV3-72A0A0B4J1Y9 119 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 H0Y980 276 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 SFTA3P0C7M3 94 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 COMMD1Q8N668 190 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 OR1L8Q8NGR8 309 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 CCL19Q99731 98 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 OR51I2Q9H344 312 aa12.61□□□□□ -0.39
SYMPK-213ENST00000599460 PATZ1Q9HBE1 687 aaKnown RBP12.61□□□□□ -0.39
SYMPK-213ENST00000599460 C7orf66A4D0T2 115 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 J3QR06 171 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 CLN5O75503 358 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 RHBDL1O75783 438 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 GAPDHP04406 335 aaKnown RBP12.6□□□□□ -0.39
SYMPK-213ENST00000599460 BMI1P35226 326 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 SULT1A1P50225 295 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 PSG7Q13046 419 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 KIAA0141Q14154 515 aaPredicted RBP12.6□□□□□ -0.39
SYMPK-213ENST00000599460 ZNF66Q6ZN08 573 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 OR1L4Q8NGR5 311 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 OR1B1Q8NGR6 318 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 A0A1B0GTI1 187 aa12.6□□□□□ -0.39
SYMPK-213ENST00000599460 GOSR1O95249 250 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms