RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SSX2Q16385 188 aa17.93■□□□□ 0.46
CHMP2A-204ENST00000597848 LINC00311Q8N616 119 aa17.93■□□□□ 0.46
CHMP2A-204ENST00000597848 ZNF439Q8NDP4 499 aa17.93■□□□□ 0.46
CHMP2A-204ENST00000597848 OR2AK2Q8NG84 335 aa17.93■□□□□ 0.46
CHMP2A-204ENST00000597848 OR52I2Q8NH67 350 aa17.93■□□□□ 0.46
CHMP2A-204ENST00000597848 MALSU1Q96EH3 234 aa17.93■□□□□ 0.46
CHMP2A-204ENST00000597848 ZNF48Q96MX3 618 aaPredicted RBP17.93■□□□□ 0.46
CHMP2A-204ENST00000597848 TRBV6-7A0A0A0MS04 114 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 IFNA2P01563 188 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 PAX6P26367 422 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 IL3RAP26951 378 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 LY6G6FQ5SQ64 297 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 LDLRAD2Q5SZI1 272 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 SLC25A48Q6ZT89 311 aaKnown RBP17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 SNAPC3Q92966 411 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 AJUBAQ96IF1 538 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 ABHD14AQ9BUJ0 271 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 RDH8Q9NYR8 311 aa17.92■□□□□ 0.46
CHMP2A-204ENST00000597848 RBBP9O75884 186 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 DIRAS3O95661 229 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 RCVRNP35243 200 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 MRPS10P82664 201 aaKnown RBP17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 DGCR2P98153 550 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 PLA1AQ53H76 456 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 SPANXN2Q5MJ10 180 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 CCDC190Q86UF4 302 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 LYG1Q8N1E2 194 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 DYNAPQ8N1N2 210 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 EDARADDQ8WWZ3 215 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 RPEQ96AT9 228 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 SOSTQ9BQB4 213 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 PARP12Q9H0J9 701 aaKnown RBP17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 C11orf54Q9H0W9 315 aaPredicted RBP17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 ANAPC10Q9UM13 185 aa17.91■□□□□ 0.46
CHMP2A-204ENST00000597848 GABARAPH6UMI1 98 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 ST8SIA5O15466 376 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 NAT1P18440 290 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 HLA-DMAP28067 261 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 OR3A3P47888 321 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 BAMBIQ13145 260 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 PYDC2Q56P42 97 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 TPTE2P1Q5T6R2 138 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 OR5AP2Q8NGF4 316 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 NECAP2Q9NVZ3 263 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 KLK11Q9UBX7 282 aa17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 ANK3Q12955 4377 aaKnown RBP17.9■□□□□ 0.46
CHMP2A-204ENST00000597848 LY6LH3BQJ8 138 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 PMP2P02689 132 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 RAB7AP51149 207 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 TAS2R46P59540 309 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 ACTBP60709 375 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 ACTG1P63261 375 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 Q6YL49 198 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 H1FOOQ8IZA3 346 aaPredicted RBP17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 OR5H2Q8NGV7 314 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 TOMM40LQ969M1 308 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 MEGF9Q9H1U4 602 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 MTFP1Q9UDX5 166 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 RNF150Q9ULK6 438 aa17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 RBM7Q9Y580 266 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-204ENST00000597848 ITGB1BP1O14713 200 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 CTDSPLO15194 276 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 NFYAP23511 347 aaPredicted RBP17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 CDK10Q15131 360 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 TUSC1Q2TAM9 212 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 LYSMD2Q8IV50 215 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 SMIM4Q8WVI0 70 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 TOLLIPQ9H0E2 274 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 PRDM13Q9H4Q3 707 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 TNFRSF19Q9NS68 423 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 PTTG2Q9NZH5 202 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 V9GYH0 126 aa17.88■□□□□ 0.45
CHMP2A-204ENST00000597848 J3QRK9 145 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 TCF21O43680 179 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 OR5H8P0DN80 308 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 DIAPH2-AS1Q14236 149 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 JMJD8Q96S16 334 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 SSX3Q99909 188 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 ABCB10Q9NRK6 738 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 EHFQ9NZC4 300 aa17.87■□□□□ 0.45
CHMP2A-204ENST00000597848 OOSP1A8MZH6 123 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 ZNF736B4DX44 427 aaPredicted RBP17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 HSD17B6O14756 317 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 HOXA3O43365 443 aaPredicted RBP17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 GAPDHP04406 335 aaKnown RBP17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 OR8U9P0C7N5 309 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 PTBP1P26599 531 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 FCGR2CP31995 323 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 HRH1P35367 487 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 ETV6P41212 452 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 REG1BP48304 166 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 RFX2P48378 723 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 ARHGDIBP52566 201 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 LRRC75BQ2VPJ9 315 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 CCDC144NLQ6NUI1 221 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 LDLRAD3Q86YD5 345 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 OR8U1Q8NH10 309 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 SSMEM1Q8WWF3 244 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 ABHD14BQ96IU4 210 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 DUX5Q96PT3 197 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms