RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 UBALD1Q8TB05 177 aa11.99□□□□□ -0.49
TGFB1-202ENST00000597453 CCDC107Q8WV48 283 aa11.99□□□□□ -0.49
TGFB1-202ENST00000597453 KCTD7Q96MP8 289 aa11.99□□□□□ -0.49
TGFB1-202ENST00000597453 NOL4LQ96MY1 436 aaPredicted RBP11.99□□□□□ -0.49
TGFB1-202ENST00000597453 SULT4A1Q9BR01 284 aa11.99□□□□□ -0.49
TGFB1-202ENST00000597453 TRAPPC2LQ9UL33 140 aa11.99□□□□□ -0.49
TGFB1-202ENST00000597453 LOC100506127A0A0U1RQW1 187 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 TMEM272A0A1B0GTI8 110 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 CCDC160A6NGH7 325 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 FOXI3A8MTJ6 420 aaPredicted RBP11.98□□□□□ -0.49
TGFB1-202ENST00000597453 IGKV1D-33P01593 117 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 IGKV1-33P01594 117 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 BLVRBP30043 206 aaPredicted RBP11.98□□□□□ -0.49
TGFB1-202ENST00000597453 RAB7AP51149 207 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 TMEM30BQ3MIR4 351 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 C18orf65Q6ZTR6 163 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 C6orf201Q7Z4U5 140 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 ZNF554Q86TJ5 538 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 OR8H3Q8N146 312 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 OR52M1Q8NGK5 317 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 OR10X1Q8NGY0 326 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 OR4K15Q8NH41 348 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 MRPL30Q8TCC3 161 aaKnown RBP11.98□□□□□ -0.49
TGFB1-202ENST00000597453 ARL11Q969Q4 196 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 YIPF6Q96EC8 236 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 RCC1LQ96I51 464 aaKnown RBP11.98□□□□□ -0.49
TGFB1-202ENST00000597453 CYYR1Q96J86 154 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 RAB9BQ9NP90 201 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 MBNL3Q9NUK0 354 aaKnown RBP11.98□□□□□ -0.49
TGFB1-202ENST00000597453 LINC00527Q9UJ94 153 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 HSF4Q9ULV5 492 aa11.98□□□□□ -0.49
TGFB1-202ENST00000597453 KMT2CQ8NEZ4 4911 aaKnown RBP11.98□□□□□ -0.49
TGFB1-202ENST00000597453 COL7A1Q02388 2944 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 SMIM30A4D0T7 59 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 C12orf77C9JDV5 145 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 HSD17B6O14756 317 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 SOCS1O15524 211 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 FGF16O43320 207 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 RAB6AP20340 208 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 REG1BP48304 166 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 MRPL41Q8IXM3 137 aaKnown RBP11.97□□□□□ -0.49
TGFB1-202ENST00000597453 OR56B1Q8NGI3 324 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 FAAP24Q9BTP7 215 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 CENPOQ9BU64 300 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 PLEKHJ1Q9NW61 149 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 RAB22AQ9UL26 194 aa11.97□□□□□ -0.49
TGFB1-202ENST00000597453 IGHV3-72A0A0B4J1Y9 119 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 WI2-2373I1.2A0A1W2PRP0 233 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 LINC01548A6NM66 108 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 SERPINE3A8MV23 424 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 SDCBPO00560 298 aaPredicted RBP11.96□□□□□ -0.49
TGFB1-202ENST00000597453 SPINT2O43291 252 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 RCC1P18754 421 aaPredicted RBP11.96□□□□□ -0.49
TGFB1-202ENST00000597453 HOXD3P31249 432 aaPredicted RBP11.96□□□□□ -0.49
TGFB1-202ENST00000597453 SDC2P34741 201 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 VEGFCP49767 419 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 RPL23AP62750 156 aaKnown RBP11.96□□□□□ -0.49
TGFB1-202ENST00000597453 ZNF816Q0VGE8 651 aaPredicted RBP11.96□□□□□ -0.49
TGFB1-202ENST00000597453 PLA2G7Q13093 441 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 SFXN4Q6P4A7 337 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 CHPT1Q8WUD6 406 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 PTX4Q96A99 478 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 RNF167Q9H6Y7 350 aa11.96□□□□□ -0.49
TGFB1-202ENST00000597453 IGHV3-43A0A0B4J1X8 118 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 A0A0B4J203 849 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 IGHV1-3A0A0C4DH29 117 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 AIREO43918 545 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 DUS4LO95620 317 aaKnown RBP11.95□□□□□ -0.5
TGFB1-202ENST00000597453 NAPSAO96009 420 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 IGHG2P01859 326 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 HBZP02008 142 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 IGHV3-43DP0DP04 118 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 SLC2A2P11168 524 aaPredicted RBP11.95□□□□□ -0.5
TGFB1-202ENST00000597453 THBS3P49746 956 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 TMEM50BP56557 158 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 EBI3Q14213 229 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 Q3ZCU0 254 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 C8orf86Q6ZUL3 223 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 MOB1BQ7L9L4 216 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 SLC35E3Q7Z769 313 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 MOB3BQ86TA1 216 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 Q8N6K4 173 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 RBMXL1Q96E39 390 aaKnown RBP11.95□□□□□ -0.5
TGFB1-202ENST00000597453 EAF1Q96JC9 268 aaPredicted RBP11.95□□□□□ -0.5
TGFB1-202ENST00000597453 TAF9BQ9HBM6 251 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 GFOD1Q9NXC2 390 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 KCNIP1Q9NZI2 227 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 DAPK2Q9UIK4 370 aa11.95□□□□□ -0.5
TGFB1-202ENST00000597453 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 SLC31A2O15432 143 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 GAPDHP04406 335 aaKnown RBP11.94□□□□□ -0.5
TGFB1-202ENST00000597453 SCAND1P57086 179 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 MXD1Q05195 221 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 ZNF880Q6PDB4 577 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 IZUMO1Q8IYV9 350 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 LINC00311Q8N616 119 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 C8orf31Q8N9H6 132 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 OR13F1Q8NGS4 319 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 ST6GALNAC6Q969X2 333 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 ISOC1Q96CN7 298 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms