RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MAFIPQ8WZ33 124 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 ABHD14AQ9BUJ0 271 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 PITPNC1Q9UKF7 332 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 TCF19Q9Y242 345 aa15.84■□□□□ 0.13
SHKBP1-214ENST00000597396 HSD17B6O14756 317 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 FABP7O15540 132 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 LPLP06858 475 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 DTYMKP23919 212 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 ZBTB25P24278 435 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 SOX6P35712 828 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 ZNF134P52741 427 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 SPCS2Q15005 226 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 LY6G6FQ5SQ64 297 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 LIAT1Q6ZQX7 453 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 OR2AK2Q8NG84 335 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 OR4A4PQ8NGN8 299 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 RAB18Q9NP72 206 aa15.83■□□□□ 0.12
SHKBP1-214ENST00000597396 TMEM89A2RUT3 159 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 XRCC3O43542 346 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 GAPDHP04406 335 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 DIAPH2-AS1Q14236 149 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 TMEM69Q5SWH9 247 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 OR8H3Q8N146 312 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 LYG1Q8N1E2 194 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 DTX3Q8N9I9 347 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 TAF15Q92804 592 aaKnown RBP eCLIP15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 ST6GALNAC5Q9BVH7 336 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 C1RLQ9NZP8 487 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 OR1A1Q9P1Q5 309 aa15.82■□□□□ 0.12
SHKBP1-214ENST00000597396 CCDC160A6NGH7 325 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 APOA1P02647 267 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 EIF4EP06730 217 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 GSTT2P0CG29 244 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 GSTT2BP0CG30 244 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 CEACAM6P40199 344 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 REG1BP48304 166 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 ZNF816Q0VGE8 651 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 FOXL1Q12952 345 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 SRSF7Q16629 238 aaKnown RBP eCLIP15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 TMEM219Q86XT9 240 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 CAPSLQ8WWF8 208 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 EDARADDQ8WWZ3 215 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 ISOC1Q96CN7 298 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 CMTM3Q96MX0 182 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 AUNIPQ9H7T9 357 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 NBEAL1Q6ZS30 2694 aa15.81■□□□□ 0.12
SHKBP1-214ENST00000597396 A0A1W2PPI3 338 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 A6NDX4 124 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 TIMM23O14925 209 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 BET1O15155 118 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 HPGDSO60760 199 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 CD24P25063 80 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 RAG2P55895 527 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 C12orf54Q6X4T0 127 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 Q6ZS49 121 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 MOB3BQ86TA1 216 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 DRAM1Q8N682 238 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 OR56B4Q8NH76 319 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 CABLES2Q9BTV7 478 aa15.8■□□□□ 0.12
SHKBP1-214ENST00000597396 IGHV1-3A0A0C4DH29 117 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 IGKV1-6A0A0C4DH72 117 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 SMIM31A0A1B0GVY4 71 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 FAM25AB3EWG3 89 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 FAM25CB3EWG5 89 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 FAM25GB3EWG6 89 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 H3BMQ9 156 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 ST8SIA5O15466 376 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 TXNL1O43396 289 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 SSX5O60225 188 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 ZNF137PP52743 207 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 TAS2R20P59543 309 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 HERPUD1Q15011 391 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 IGSF11Q5DX21 431 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 CCBE1Q6UXH8 406 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 TGIF2LXQ8IUE1 241 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 OR4F5Q8NH21 305 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 OR10J5Q8NHC4 309 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 RTN4IP1Q8WWV3 396 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 ST6GALNAC6Q969X2 333 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 GINS4Q9BRT9 223 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 CEPT1Q9Y6K0 416 aa15.79■□□□□ 0.12
SHKBP1-214ENST00000597396 IGKV1D-8A0A087WSZ0 117 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 ITGB1BP1O14713 200 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 CHST1O43916 411 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 NDUFA7O95182 113 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 PTHLHP12272 177 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 RELBQ01201 579 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 AWAT1Q58HT5 328 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 CFHR4Q92496 578 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 PARP12Q9H0J9 701 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 RDH8Q9NYR8 311 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 PIPOXQ9P0Z9 390 aa15.78■□□□□ 0.12
SHKBP1-214ENST00000597396 LANCL1O43813 399 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 DIRAS3O95661 229 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 SNRNP70P08621 437 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 FAM106CPP0CH98 169 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 ELK1P19419 428 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 HES1Q14469 280 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 Q6ZSV7 163 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 DYNC2LI1Q8TCX1 351 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms