RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 RANBP1P43487 201 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 MADCAM1Q13477 382 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 DIAPH2-AS1Q14236 149 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 INSL4Q14641 139 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 FAM53AQ6NSI3 398 aaPredicted RBP11.99□□□□□ -0.49
LIG1-214ENST00000597146 SLC16A12Q6ZSM3 486 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 OR1N2Q8NGR9 330 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 PHYHIPQ92561 330 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 PLGRKTQ9HBL7 147 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 C19orf73Q9NVV2 129 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 PSG11Q9UQ72 335 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 A0A087X0M5 115 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 A0A1B0GX30 115 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 UBE2QL1A1L167 161 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 OVOL1O14753 267 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 ARL6IP5O75915 188 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 CGB3P0DN86 165 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 CGB7P0DN87 165 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 CRHBPP24387 322 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 PSMA1P25786 263 aaKnown RBP11.98□□□□□ -0.49
LIG1-214ENST00000597146 SSTR5P35346 364 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 GNB1P62873 340 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 CFHR3Q02985 330 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 C6orf183Q5T699 404 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 PRSS48Q7RTY5 328 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 PRR18Q8N4B5 295 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 OR4K15Q8NH41 348 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 OR5B12Q96R08 314 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 RETNQ9HD89 108 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 ZNF581Q9P0T4 197 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 KIAA1456Q9P272 454 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 RAB26Q9ULW5 256 aa11.98□□□□□ -0.49
LIG1-214ENST00000597146 FAM90A10PA6NDY2 464 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 FAM90A7PA6NKC0 464 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 FAM90A23PA8MXZ1 464 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 NPIPB11E5RHQ5 1161 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 ORC5O43913 435 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 ATP6V1G2O95670 118 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 LY6G6CO95867 125 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 IL3RAP26951 378 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 HTR2CP28335 458 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 VHLP40337 213 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 MAP2K4P45985 399 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 ZNF616Q08AN1 781 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 TPBGQ13641 420 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 IRF3Q14653 427 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 SYT6Q5T7P8 510 aaPredicted RBP11.97□□□□□ -0.49
LIG1-214ENST00000597146 ZNF497Q6ZNH5 498 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 MOB3BQ86TA1 216 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 HAPLN4Q86UW8 402 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 Q8N1Y9 231 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 KCNG3Q8TAE7 436 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 UBALD1Q8TB05 177 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 ST6GALNAC6Q969X2 333 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 MGLLQ99685 303 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 GNG12Q9UBI6 72 aa11.97□□□□□ -0.49
LIG1-214ENST00000597146 LSM2Q9Y333 95 aaKnown RBP11.97□□□□□ -0.49
LIG1-214ENST00000597146 A0A1W2PPE3 182 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 I3L521 148 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 CA11O75493 328 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 IGHG4P01861 327 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 GAPDHP04406 335 aaKnown RBP11.96□□□□□ -0.49
LIG1-214ENST00000597146 GLAP06280 429 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 PSMB8P28062 276 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 RAB7AP51149 207 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 PAX5Q02548 391 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 MLLT11Q13015 90 aaPredicted RBP11.96□□□□□ -0.49
LIG1-214ENST00000597146 HAGHQ16775 308 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 TRAT1Q6PIZ9 186 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 TMEM104Q8NE00 496 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 OR6Q1Q8NGQ2 317 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 MYOZ3Q8TDC0 251 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 GON7Q9BXV9 100 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 ABCG5Q9H222 651 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.49
LIG1-214ENST00000597146 CHMP1AQ9HD42 196 aaPredicted RBP11.96□□□□□ -0.49
LIG1-214ENST00000597146 IGHV3-43A0A0B4J1X8 118 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 SLC25A17O43808 307 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 PDCD6O75340 191 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 IFNA6P05013 189 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 UCHL1P09936 223 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 IGHV3-43DP0DP04 118 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 CPEP16870 476 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 PSMD7P51665 324 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 SLURP1P55000 103 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 RPS25P62851 125 aaKnown RBP11.95□□□□□ -0.5
LIG1-214ENST00000597146 OR10K2Q6IF99 312 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 LRRTM1Q86UE6 522 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 OR52M1Q8NGK5 317 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 IL17DQ8TAD2 202 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 SETD6Q8TBK2 473 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 ARPC1AQ92747 370 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
LIG1-214ENST00000597146 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 HSPB9Q9BQS6 159 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 URM1Q9BTM9 101 aaKnown RBP11.95□□□□□ -0.5
LIG1-214ENST00000597146 TMEM59Q9BXS4 323 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 ACOT13Q9NPJ3 140 aa11.95□□□□□ -0.5
LIG1-214ENST00000597146 LIN7CQ9NUP9 197 aaKnown RBP11.95□□□□□ -0.5
LIG1-214ENST00000597146 AK6Q9Y3D8 172 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms