RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 KCNIP1Q9NZI2 227 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 DPM3Q9P2X0 92 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 ANXA10Q9UJ72 324 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 TBL2Q9Y4P3 447 aaKnown RBP8.52□□□□□ -1.05
LIG1-210ENST00000596332 MINOS1-NBL1R4GNA1 71 aa8.52□□□□□ -1.05
LIG1-210ENST00000596332 A0A1W2PPI3 338 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 FAM90A9PA6NNJ1 464 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 FAM25AB3EWG3 89 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 FAM25CB3EWG5 89 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 FAM25GB3EWG6 89 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 ITGB1BP1O14713 200 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 LANCL1O43813 399 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 NOL3O60936 208 aaKnown RBP8.51□□□□□ -1.05
LIG1-210ENST00000596332 TUSC2O75896 110 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 IGLV2-14P01704 120 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 IGHV4-59P01825 116 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 FCER2P06734 321 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 PRSS3P35030 304 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 CEACAM6P40199 344 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 RAB13P51153 203 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 GNG2P59768 71 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 HABP2Q14520 560 aaPredicted RBP8.51□□□□□ -1.05
LIG1-210ENST00000596332 ZNF79Q15937 498 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 TMEM30BQ3MIR4 351 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 TPTE2P1Q5T6R2 138 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 BEST4Q8NFU0 473 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 OR52I2Q8NH67 350 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 IL1F10Q8WWZ1 152 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 SDHCQ99643 169 aaPredicted RBP8.51□□□□□ -1.05
LIG1-210ENST00000596332 C6orf62Q9GZU0 229 aaPredicted RBP8.51□□□□□ -1.05
LIG1-210ENST00000596332 KLK11Q9UBX7 282 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 MGAT4AQ9UM21 535 aa8.51□□□□□ -1.05
LIG1-210ENST00000596332 MRPS7Q9Y2R9 242 aaKnown RBP8.51□□□□□ -1.05
LIG1-210ENST00000596332 RBMX2Q9Y388 322 aaKnown RBP8.51□□□□□ -1.05
LIG1-210ENST00000596332 CLDN34H7C241 214 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 SULT1C2O00338 296 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 CTDSPLO15194 276 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 RGS5O15539 181 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 HOXA3O43365 443 aaPredicted RBP8.5□□□□□ -1.05
LIG1-210ENST00000596332 HTR1DP28221 377 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 ETV6P41212 452 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 KIR2DS4P43632 304 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 DYNLT3P51808 116 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 PRRX1P54821 245 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 LINC00205P59089 165 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 DGCR2P98153 550 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 ATRQ13535 2644 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 KIR2DS1Q14954 304 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 SSX2Q16385 188 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 OVCH2Q7RTZ1 564 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 TAF15Q92804 592 aaKnown RBP eCLIP8.5□□□□□ -1.05
LIG1-210ENST00000596332 DIRAS2Q96HU8 199 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 SCPEP1Q9HB40 452 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 RDH8Q9NYR8 311 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 GNG12Q9UBI6 72 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 MTFP1Q9UDX5 166 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 SLC23A1Q9UHI7 598 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 HILPDAQ9Y5L2 63 aa8.5□□□□□ -1.05
LIG1-210ENST00000596332 A0A0A6YYJ9 748 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 IGKV1D-13A0A0B4J2D9 117 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 DNAJC9-AS1A6NH13 148 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 LEUTXA8MZ59 168 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 ZNF736B4DX44 427 aaPredicted RBP8.49□□□□□ -1.05
LIG1-210ENST00000596332 BET1O15155 118 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 ST8SIA5O15466 376 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 LPLP06858 475 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 FBP1P09467 338 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 IGKV1-13P0DP09 117 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 ZBTB25P24278 435 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 TALDO1P37837 337 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 OR3A3P47888 321 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 RFX2P48378 723 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 UBA52P62987 128 aaKnown RBP8.49□□□□□ -1.05
LIG1-210ENST00000596332 ZNF816Q0VGE8 651 aaPredicted RBP8.49□□□□□ -1.05
LIG1-210ENST00000596332 EIF4EBP1Q13541 118 aaPredicted RBP8.49□□□□□ -1.05
LIG1-210ENST00000596332 AANATQ16613 207 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 DHRS11Q6UWP2 260 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 ZNF833PQ6ZTB9 187 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 OR5AP2Q8NGF4 316 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 SMIM4Q8WVI0 70 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 PHF21AQ96BD5 680 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 ABHD14BQ96IU4 210 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 DUX5Q96PT3 197 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 CHIAQ9BZP6 476 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 GAB2Q9UQC2 676 aa8.49□□□□□ -1.05
LIG1-210ENST00000596332 C2CD3Q4AC94 2353 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 IGHV1-3A0A0C4DH29 117 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 GABARAPH6UMI1 98 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 TOR1AO14656 332 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 GSTZ1O43708 216 aaPredicted RBP8.48□□□□□ -1.05
LIG1-210ENST00000596332 ZNF735P0CB33 412 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 NFYAP23511 347 aaPredicted RBP8.48□□□□□ -1.05
LIG1-210ENST00000596332 CD24P25063 80 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 CBX5P45973 191 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 MRPS15P82914 257 aaKnown RBP8.48□□□□□ -1.05
LIG1-210ENST00000596332 BAMBIQ13145 260 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 EBI3Q14213 229 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 RPL39P5Q59GN2 51 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 PYHIN1Q6K0P9 492 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms