RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SLC23A1Q9UHI7 598 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 SMIM31A0A1B0GVY4 71 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 CCDC160A6NGH7 325 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 H3BMQ9 156 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 HSPA12AO43301 675 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 SSX5O60225 188 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 HPGDSO60760 199 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 CRYBA1P05813 215 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 EIF4EP06730 217 aaKnown RBP11.57□□□□□ -0.56
LIG1-208ENST00000595758 GSTT2P0CG29 244 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 GSTT2BP0CG30 244 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 ZBTB25P24278 435 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 BRS3P32247 399 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 MNDAP41218 407 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 ACTG1P63261 375 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 TMEM69Q5SWH9 247 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 Q6ZS49 121 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 OR2AK2Q8NG84 335 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 ABHD14AQ9BUJ0 271 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 ST6GALNAC5Q9BVH7 336 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 OR1A1Q9P1Q5 309 aa11.57□□□□□ -0.56
LIG1-208ENST00000595758 IGKV1-6A0A0C4DH72 117 aa11.56□□□□□ -0.56
LIG1-208ENST00000595758 GAPDHP04406 335 aaKnown RBP11.56□□□□□ -0.56
LIG1-208ENST00000595758 CEACAM6P40199 344 aa11.56□□□□□ -0.56
LIG1-208ENST00000595758 RAB7AP51149 207 aa11.56□□□□□ -0.56
LIG1-208ENST00000595758 DIAPH2-AS1Q14236 149 aa11.56□□□□□ -0.56
LIG1-208ENST00000595758 LYG1Q8N1E2 194 aa11.56□□□□□ -0.56
LIG1-208ENST00000595758 DYNC2LI1Q8TCX1 351 aa11.56□□□□□ -0.56
LIG1-208ENST00000595758 GCDHQ92947 438 aaPredicted RBP11.56□□□□□ -0.56
LIG1-208ENST00000595758 IGKV1D-8A0A087WSZ0 117 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 HSD17B6O14756 317 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 BET1O15155 118 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 HKR1P10072 659 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 ELK1P19419 428 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 REG1BP48304 166 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 TAS2R20P59543 309 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 RPL15P61313 204 aaKnown RBP11.55□□□□□ -0.56
LIG1-208ENST00000595758 HERPUD1Q15011 391 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 IGSF11Q5DX21 431 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 OR8H3Q8N146 312 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 ST6GALNAC6Q969X2 333 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 PARP12Q9H0J9 701 aaKnown RBP11.55□□□□□ -0.56
LIG1-208ENST00000595758 CCDC59Q9P031 241 aaKnown RBP11.55□□□□□ -0.56
LIG1-208ENST00000595758 PITPNC1Q9UKF7 332 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 TCF19Q9Y242 345 aa11.55□□□□□ -0.56
LIG1-208ENST00000595758 MRPS7Q9Y2R9 242 aaKnown RBP11.55□□□□□ -0.56
LIG1-208ENST00000595758 A0A1W2PPI3 338 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 A6NDX4 124 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 FAM25AB3EWG3 89 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 FAM25CB3EWG5 89 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 FAM25GB3EWG6 89 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 ITGB1BP1O14713 200 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 TIMM23O14925 209 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 DIRAS3O95661 229 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 LPLP06858 475 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 PTHLHP12272 177 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 CD24P25063 80 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 ZNF137PP52743 207 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 ZNF816Q0VGE8 651 aaPredicted RBP11.54□□□□□ -0.56
LIG1-208ENST00000595758 DHRS7BQ6IAN0 325 aaPredicted RBP11.54□□□□□ -0.56
LIG1-208ENST00000595758 MOB3BQ86TA1 216 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 DRAM1Q8N682 238 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 OR10J5Q8NHC4 309 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 CAPSLQ8WWF8 208 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 RTN4IP1Q8WWV3 396 aaPredicted RBP11.54□□□□□ -0.56
LIG1-208ENST00000595758 EDARADDQ8WWZ3 215 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 CABLES2Q9BTV7 478 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 C11orf54Q9H0W9 315 aaPredicted RBP11.54□□□□□ -0.56
LIG1-208ENST00000595758 RAB18Q9NP72 206 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 RDH8Q9NYR8 311 aa11.54□□□□□ -0.56
LIG1-208ENST00000595758 RSL24D1Q9UHA3 163 aaKnown RBP11.54□□□□□ -0.56
LIG1-208ENST00000595758 TRBV6-7A0A0A0MS04 114 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 IGHV1-3A0A0C4DH29 117 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 TMEM89A2RUT3 159 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 ST8SIA5O15466 376 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 RGS5O15539 181 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 LANCL1O43813 399 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 CTXN2P0C2S0 81 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 FAM106CPP0CH98 169 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 PRSS3P35030 304 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 CBX5P45973 191 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 CCBE1Q6UXH8 406 aaPredicted RBP11.53□□□□□ -0.56
LIG1-208ENST00000595758 HOGA1Q86XE5 327 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 TMEM219Q86XT9 240 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 TGIF2LXQ8IUE1 241 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 OR56B4Q8NH76 319 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 TAF15Q92804 592 aaKnown RBP eCLIP11.53□□□□□ -0.56
LIG1-208ENST00000595758 GINS4Q9BRT9 223 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 RBM38Q9H0Z9 239 aaKnown RBP11.53□□□□□ -0.56
LIG1-208ENST00000595758 IFI27L2Q9H2X8 130 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 C1RLQ9NZP8 487 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 ANXA10Q9UJ72 324 aa11.53□□□□□ -0.56
LIG1-208ENST00000595758 ZNF701M0R085 212 aaPredicted RBP11.52□□□□□ -0.57
LIG1-208ENST00000595758 CTDSP2O14595 271 aa11.52□□□□□ -0.57
LIG1-208ENST00000595758 TXNL1O43396 289 aa11.52□□□□□ -0.57
LIG1-208ENST00000595758 CHST1O43916 411 aa11.52□□□□□ -0.57
LIG1-208ENST00000595758 HLA-DQB1P01920 261 aa11.52□□□□□ -0.57
LIG1-208ENST00000595758 OR3A3P47888 321 aa11.52□□□□□ -0.57
LIG1-208ENST00000595758 RAG2P55895 527 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms